RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 TMEM107Q6UX40 140 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 Q6ZRP5 223 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 Q8N2B8 174 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 MMGT1Q8N4V1 131 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 NPRL2Q8WTW4 380 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 EXOSC8Q96B26 276 aaKnown RBP5.29□□□□□ -1.56
SVIP-204ENST00000530199 CCDC42Q96M95 316 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 AMDHD1Q96NU7 426 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 CHP1Q99653 195 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 NHEJ1Q9H9Q4 299 aaPredicted RBP5.29□□□□□ -1.56
SVIP-204ENST00000530199 EXD2Q9NVH0 621 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 DDX18Q9NVP1 670 aaKnown RBP5.29□□□□□ -1.56
SVIP-204ENST00000530199 CNOT2Q9NZN8 540 aaKnown RBP5.29□□□□□ -1.56
SVIP-204ENST00000530199 CD274Q9NZQ7 290 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 TMEM181Q9P2C4 612 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 MIOXQ9UGB7 285 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 CHRNA9Q9UGM1 479 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 MAB21L2Q9Y586 359 aa5.29□□□□□ -1.56
SVIP-204ENST00000530199 ENSAO43768 121 aaKnown RBP5.28□□□□□ -1.56
SVIP-204ENST00000530199 FSTL3O95633 263 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 LYNP07948 512 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 FHITP49789 147 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 OR2B6P58173 313 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 TAS2R39P59534 338 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 SLC35A1P78382 337 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 MERTKQ12866 999 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 NOTCH2NLQ7Z3S9 236 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 CDRT4Q8N9R6 151 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 ADAD2Q8NCV1 583 aaKnown RBP5.28□□□□□ -1.56
SVIP-204ENST00000530199 TMEM234Q8WY98 164 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 C11orf40Q8WZ69 217 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 OVOL2Q9BRP0 275 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 NAT10Q9H0A0 1025 aaKnown RBP5.28□□□□□ -1.56
SVIP-204ENST00000530199 RAB17Q9H0T7 212 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 PLCXD1Q9NUJ7 323 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 ACER3Q9NUN7 267 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 KLK11Q9UBX7 282 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 FBXL3Q9UKT7 428 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 DIMT1Q9UNQ2 313 aaKnown RBP5.28□□□□□ -1.56
SVIP-204ENST00000530199 MRPS28Q9Y2Q9 187 aaKnown RBP5.28□□□□□ -1.56
SVIP-204ENST00000530199 LRP12Q9Y561 859 aa5.28□□□□□ -1.56
SVIP-204ENST00000530199 DYNC1H1Q14204 4646 aaKnown RBP5.27□□□□□ -1.57
SVIP-204ENST00000530199 A0A1B0GW55 424 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 PHYHO14832 338 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 ZNF264O43296 627 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 NXPH2O95156 264 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 HLA-HP01893 362 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 DUX4L2P0CJ85 424 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 DUX4L3P0CJ86 424 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 DUX4L5P0CJ88 424 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 DUX4L6P0CJ89 424 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 DUX4L7P0CJ90 424 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 RPS2P15880 293 aaKnown RBP5.27□□□□□ -1.57
SVIP-204ENST00000530199 PGAM1P18669 254 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 PRDX6P30041 224 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 FOXA1P55317 472 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 ATP6V0D1P61421 351 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 OR4D1Q15615 310 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 ARHGAP11BQ3KRB8 267 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 RFTN2Q52LD8 501 aaPredicted RBP5.27□□□□□ -1.57
SVIP-204ENST00000530199 TEX35Q5T0J7 233 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 DUX4L9Q6RFH8 374 aaPredicted RBP5.27□□□□□ -1.57
SVIP-204ENST00000530199 ZER1Q7Z7L7 766 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 RNF148Q8N7C7 305 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 OR9Q2Q8NGE9 314 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 OR56B1Q8NGI3 324 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 MAIP1Q8WWC4 291 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 C1orf54Q8WWF1 131 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 LIPHQ8WWY8 451 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 C16orf45Q96MC5 204 aaPredicted RBP5.27□□□□□ -1.57
SVIP-204ENST00000530199 TM2D3Q9BRN9 247 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 RAB18Q9NP72 206 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 NUDT4Q9NZJ9 180 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 DUX4Q9UBX2 424 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 RNF11Q9Y3C5 154 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 SMAD5-AS1Q9Y6J3 95 aa5.27□□□□□ -1.57
SVIP-204ENST00000530199 HSPG2P98160 4391 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 DNAH11Q96DT5 4516 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 A0A087X002 238 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 ZSCAN5BA6NJL1 495 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 ZNF99A8MXY4 864 aaPredicted RBP5.26□□□□□ -1.57
SVIP-204ENST00000530199 MFN2O95140 757 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 VAMP5O95183 116 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 IL3P08700 152 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 PRPS2P11908 318 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 ZNF26P17031 533 aaPredicted RBP5.26□□□□□ -1.57
SVIP-204ENST00000530199 FUT1P19526 365 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 NCBP2P52298 156 aaKnown RBP eCLIP5.26□□□□□ -1.57
SVIP-204ENST00000530199 DHODHQ02127 395 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 SNX1Q13596 522 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 NDUFAF6Q330K2 333 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 SPRNQ5BIV9 151 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 WDR25Q64LD2 544 aaPredicted RBP5.26□□□□□ -1.57
SVIP-204ENST00000530199 FAM159AQ6UWV7 190 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 RNF130Q86XS8 419 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.26□□□□□ -1.57
SVIP-204ENST00000530199 ZNF584Q8IVC4 421 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 UBL4BQ8N7F7 174 aa5.26□□□□□ -1.57
SVIP-204ENST00000530199 OR8B3Q8NGG8 313 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms