RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SYT7O43581 403 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 FOXH1O75593 365 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 NRASP01111 189 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 GNAO1P09471 354 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 ZFP36P26651 326 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 CCR9P51686 369 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 GNG3P63215 75 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 LCN2P80188 198 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 CEP78Q5JTW2 689 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 CLVS2Q5SYC1 327 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 SFRP4Q6FHJ7 346 aaPredicted RBP10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 WDR82Q6UXN9 313 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 KCTD8Q6ZWB6 473 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 RDH10Q8IZV5 341 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 C8orf59Q8N0T1 100 aaPredicted RBP10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 LRRC29Q8WV35 223 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 TFAP2CQ92754 450 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 RPL3LQ92901 407 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 C4orf36Q96KX1 117 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 JAM3Q9BX67 310 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 OR51I2Q9H344 312 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 ISG20L2Q9H9L3 353 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 TRIM36Q9NQ86 728 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 POLR3KQ9Y2Y1 108 aaPredicted RBP10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 ARHGAP32A7KAX9 2087 aa10.6□□□□□ -0.71
CCDC90B-216ENST00000529856 TRAV38-1A0A0B4J264 116 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 IRGMA1A4Y4 181 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 OOEPA6NGQ2 149 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 A6NIN4 97 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 OR5B21A6NL26 309 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 C3orf80F5H4A9 247 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 ISG15P05161 165 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 HTR1AP08908 422 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 UBCP0CG48 685 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 LIMS3P0CW19 117 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 LIMS4P0CW20 117 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 RPS2P15880 293 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 EGR1P18146 543 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 HNF1AP20823 631 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 DCKP27707 260 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 CD80P33681 288 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 GPM6AP51674 278 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 NANOS3P60323 173 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 SEC61A1P61619 476 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 KCNJ8Q15842 424 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 DMRTC1Q5HYR2 192 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 TMEM244Q5VVB8 128 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 TEX36Q5VZQ5 186 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 PLCXD3Q63HM9 321 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 LAIR2Q6ISS4 152 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 LYPD2Q6UXB3 125 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 DCDC5Q6ZRR9 648 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 IL17RELQ6ZVW7 336 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 OR10Z1Q8NGY1 313 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 FBLIM1Q8WUP2 373 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 NEIL1Q96FI4 390 aaPredicted RBP10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 GPR173Q9NS66 373 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 LRCH1Q9Y2L9 728 aa10.59□□□□□ -0.71
CCDC90B-216ENST00000529856 DOCK11Q5JSL3 2073 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 PPIAL4CA0A0B4J2A2 164 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 A0A0G2JMP0 313 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 A0A0X1KG70 313 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 LOC107986453A0A1B0GWG9 222 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 OR4C45A6NMZ5 311 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 KIAA1324LA8MWY0 1029 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 A8MXK9 166 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 SRRM5B3KS81 715 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 H0YHG0 523 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 H3BSH0 61 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 NDUFA2O43678 99 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 FAM157CP0CG43 387 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 MUC1P15941 1255 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 ZNF12P17014 697 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 GATA3P23771 443 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 MRPL28Q13084 256 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 ALKBH1Q13686 389 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 ESCO2Q56NI9 601 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 FAHD2BQ6P2I3 314 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 PRIMA1Q86XR5 153 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 OR4M2Q8NGB6 313 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 GGHQ92820 318 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 C10orf35Q96D05 121 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 FAHD2AQ96GK7 314 aa10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 DIMT1Q9UNQ2 313 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-216ENST00000529856 SVEP1Q4LDE5 3571 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 NAV3Q8IVL0 2385 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 ANKRD61A6NGH8 418 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 E9PI62 339 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 TRAPPC2LH3BP13 241 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 J3QLI3 93 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 PHF1O43189 567 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 GYPAP02724 150 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 PITPNBP48739 271 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 ETV1P50549 477 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 GBX2P52951 348 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 AQP4P55087 323 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 MICBQ29980 383 aa10.57□□□□□ -0.72
CCDC90B-216ENST00000529856 KRTAP21-3Q3LHN1 58 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms