RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 EBAG9O00559 213 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 TNFRSF13BO14836 293 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-213ENST00000527897 MTRF1O75570 445 aaKnown RBP12.89□□□□□ -0.35
CAPN1-213ENST00000527897 TTRP02766 147 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 TFF1P04155 84 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 SFTPBP07988 381 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 MUC1P15941 1255 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-213ENST00000527897 HTR1FP30939 366 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 BAMBIQ13145 260 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 ZFP1Q6P2D0 407 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 BRD3OSQ6XYD6 125 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 BTN2A1Q7KYR7 527 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 FAM216BQ8N7L0 139 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 ZDHHC22Q8N966 263 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 PNLDC1Q8NA58 520 aaKnown RBP12.89□□□□□ -0.35
CAPN1-213ENST00000527897 OR8J1Q8NGP2 316 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 FAM216AQ8WUB2 273 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 DACT3Q96B18 629 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-213ENST00000527897 TLNRD1Q9H1K6 362 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 MRM2Q9UI43 246 aaKnown RBP12.89□□□□□ -0.35
CAPN1-213ENST00000527897 ENPP5Q9UJA9 477 aa12.89□□□□□ -0.35
CAPN1-213ENST00000527897 ANK2Q01484 3957 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 A0A1W2PQL4 384 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-213ENST00000527897 A6NIN4 97 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 SRRM5B3KS81 715 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-213ENST00000527897 P2RY10O00398 339 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 RHBDL1O75783 438 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 TOX4O94842 621 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 PPIAL4GP0DN37 164 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 ATP6V1B1P15313 513 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 ARF6P62330 175 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 UBA52P62987 128 aaKnown RBP12.88□□□□□ -0.35
CAPN1-213ENST00000527897 GNG3P63215 75 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 EGR3Q06889 387 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 CEACAM21Q3KPI0 293 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 GPR157Q5UAW9 335 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 METTL11BQ5VVY1 283 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 DOK3Q7L591 496 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 SLC36A1Q7Z2H8 476 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 RFKQ969G6 155 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 UBE2FQ969M7 185 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 EME1Q96AY2 570 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 ZNF48Q96MX3 618 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-213ENST00000527897 MOB1AQ9H8S9 216 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 GPR173Q9NS66 373 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 HAO2Q9NYQ3 351 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 SLC22A13Q9Y226 551 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 SNX5Q9Y5X3 404 aa12.88□□□□□ -0.35
CAPN1-213ENST00000527897 MDFIC2A0A1B0GVS7 189 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 DNAJC9-AS1A6NH13 148 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 NKX6-3A6NJ46 265 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 ZNF879B4DU55 563 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 NDUFB3O43676 98 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 SRSF10O75494 262 aaKnown RBP12.87□□□□□ -0.35
CAPN1-213ENST00000527897 FCN3O75636 299 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 DHRS3O75911 302 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 NRASP01111 189 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 ALPLP05186 524 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 OR2T7P0C7T2 308 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 SELLP14151 372 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 GLRA1P23415 457 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 CFHR2P36980 270 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 MTNR1AP48039 350 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 ZNF684Q5T5D7 378 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 RUSC1-AS1Q66K80 236 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 HAGHLQ6PII5 290 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-213ENST00000527897 ELMOD2Q8IZ81 293 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 CBR4Q8N4T8 237 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 OR10Z1Q8NGY1 313 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 OR2T27Q8NH04 317 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 H1FXQ92522 213 aaKnown RBP12.87□□□□□ -0.35
CAPN1-213ENST00000527897 ONECUT1Q9UBC0 465 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 KAAG1Q9UBP8 84 aa12.87□□□□□ -0.35
CAPN1-213ENST00000527897 METTL15A6NJ78 407 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 IGLV3-1P01715 115 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 LIPFP07098 398 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 GABRA2P47869 451 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 ALDH3A2P51648 485 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 LRRC10Q5BKY1 277 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 STUMQ69YW2 141 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 PDZD9Q8IXQ8 264 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 C10orf67Q8IYJ2 551 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 OR5A2Q8NGI9 324 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 ZDHHC16Q969W1 377 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 C12orf43Q96C57 262 aaKnown RBP12.86□□□□□ -0.35
CAPN1-213ENST00000527897 WDFY2Q96P53 400 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 RAB3IPQ96QF0 476 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-213ENST00000527897 OR51I2Q9H344 312 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 TNFRSF19Q9NS68 423 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 USE1Q9NZ43 259 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 NLKQ9UBE8 527 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 GNG8Q9UK08 70 aa12.86□□□□□ -0.35
CAPN1-213ENST00000527897 A0A1B0GVI7 797 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 OR5B21A6NL26 309 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 ENTPD6O75354 484 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 ECDO95905 644 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-213ENST00000527897 PLATP00750 562 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 TP53I3Q53FA7 332 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 FAM76BQ5HYJ3 339 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms