RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 B8ZZF3 427 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 KLRC4-KLRK1H3BQV0 150 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 J3QLW9 94 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 K7EM74 188 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 M0R3G1 203 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 GPR171O14626 319 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 AIREO43918 545 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 SLC16A7O60669 478 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 GPX5O75715 221 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 WISP2O76076 250 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 GABARAPO95166 117 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 MPZL1O95297 269 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 CRYZL1O95825 349 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 HPNP05981 417 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 HOXB5P09067 269 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 OR8G3PP0DMU2 310 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 EGR2P11161 476 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 ZNF19P17023 458 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ZNF43P17038 809 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 TNFRSF1AP19438 455 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 CCNOP22674 350 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 EIF2S3P41091 472 aaKnown RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 LHX2P50458 406 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 DAP3P51398 398 aaKnown RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 BCAP31P51572 246 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 TMBIM6P55061 237 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 CLDN17P56750 224 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 CLDN18P56856 261 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 OR12D2P58182 307 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 RAP1BP61224 184 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 NCS1P62166 190 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 RAP1AP62834 184 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 RPS25P62851 125 aaKnown RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 CSNK2A1P68400 391 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 MLLT11Q13015 90 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 LY6DQ14210 128 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 GGTLC2Q14390 218 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 PON3Q15166 354 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 SF3B4Q15427 424 aaKnown RBP eCLIP3.64□□□□□ -1.83
CD44-226ENST00000527889 CTF1Q16619 201 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 HYAL4Q2M3T9 481 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 SLC35D3Q5M8T2 416 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 RNLSQ5VYX0 342 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 HBMQ6B0K9 141 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 TMEM225Q6GV28 225 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ANKRD16Q6P6B7 361 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ZNF474Q6S9Z5 364 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 ZNF322Q6U7Q0 402 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 NHLRC1Q6VVB1 395 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 PLEKHG7Q6ZR37 379 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 DPY19L4Q7Z388 723 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 SLC22A16Q86VW1 577 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 P2RY8Q86VZ1 359 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 KLBQ86Z14 1044 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 TIGD4Q8IY51 512 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 GPR137CQ8N3F9 429 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ACBD7Q8N6N7 88 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 TMEM217Q8N7C4 229 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 TMEM178AQ8NBL3 297 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ZNF485Q8NCK3 441 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 NOXO1Q8NFA2 376 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 STEAP2Q8NFT2 490 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 OR9K2Q8NGE7 335 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 OR6N2Q8NGY6 317 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 OR2T4Q8NH00 348 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 OR52N1Q8NH53 320 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 OR10D3Q8NH80 312 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 OR2V1Q8NHB1 315 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ZNF420Q8TAQ5 688 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 NDNFQ8TB73 568 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 RAB2BQ8WUD1 216 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 TMEM170AQ8WVE7 144 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ROBO4Q8WZ75 1007 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 TM9SF4Q92544 642 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 NSMAFQ92636 917 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 HAS2Q92819 552 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ABTB1Q969K4 478 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 TMEM203Q969S6 136 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 C4orf36Q96KX1 117 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 INTS14Q96SY0 518 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 AMELYQ99218 206 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 DOK1Q99704 481 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 TIMP4Q99727 224 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 WACQ9BTA9 647 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ZNF416Q9BWM5 594 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 PAPOLGQ9BWT3 736 aaKnown RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 SAV1Q9H4B6 383 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 RGCCQ9H4X1 137 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 WDR76Q9H967 626 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 GPN1Q9HCN4 374 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 RANGRFQ9HD47 186 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 EXOSC4Q9NPD3 245 aaKnown RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 FAM212BQ9NTI7 297 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 MRPL22Q9NWU5 206 aaKnown RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 HAO2Q9NYQ3 351 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 DAPK2Q9UIK4 370 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 KCNG2Q9UJ96 466 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 B9D1Q9UPM9 204 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 MRPS18CQ9Y3D5 142 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms