RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 INPP5EQ9NRR6 644 aa9.9□□□□□ -0.82
SRPRA-202ENST00000527817 INTS9Q9NV88 658 aaKnown RBP9.9□□□□□ -0.82
SRPRA-202ENST00000527817 ZNF222Q9UK12 451 aa9.9□□□□□ -0.82
SRPRA-202ENST00000527817 TSSC4Q9Y5U2 329 aaPredicted RBP9.9□□□□□ -0.82
SRPRA-202ENST00000527817 C3orf84H3BNL1 204 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 F2RL2O00254 374 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 ZNF593O00488 134 aaPredicted RBP9.89□□□□□ -0.83
SRPRA-202ENST00000527817 SYNGR1O43759 233 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 EDF1O60869 148 aaKnown RBP9.89□□□□□ -0.83
SRPRA-202ENST00000527817 CST4P01036 141 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 APOC1P02654 83 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 ANXA2P07355 339 aaKnown RBP9.89□□□□□ -0.83
SRPRA-202ENST00000527817 GLRA1P23415 457 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 DCTDP32321 178 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 CX3CR1P49238 355 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 ENTPD1P49961 510 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 DYNLT3P51808 116 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 ARSJQ5FYB0 599 aaPredicted RBP9.89□□□□□ -0.83
SRPRA-202ENST00000527817 SLC35F1Q5T1Q4 408 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 ARPINQ7Z6K5 226 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 TMEM219Q86XT9 240 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 CALHM1Q8IU99 346 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 TMEM185AQ8NFB2 350 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 PROKR2Q8NFJ6 384 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 OR52H1Q8NGJ2 320 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 OR52J3Q8NH60 311 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 RNF170Q96K19 258 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 GPR61Q9BZJ8 451 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 SAR1AQ9NR31 198 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 C19orf12Q9NSK7 152 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 TBL2Q9Y4P3 447 aaKnown RBP9.89□□□□□ -0.83
SRPRA-202ENST00000527817 COMMD3-BMI1R4GMX3 469 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 TENM2Q9NT68 2774 aa9.89□□□□□ -0.83
SRPRA-202ENST00000527817 STAB2Q8WWQ8 2551 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 TCRBV4S1A1TA0A5B7 111 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 DHRS12A0PJE2 317 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 ZNF850A8MQ14 1090 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 FMO3P31513 532 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 GSSP48637 474 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 SMIM11AP58511 58 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 ERVFRD-1P60508 538 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 RPL31P62899 125 aaKnown RBP9.88□□□□□ -0.83
SRPRA-202ENST00000527817 PRDX4Q13162 271 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 KRT72Q14CN4 511 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 TCTEX1D4Q5JR98 221 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 LYPD4Q6UWN0 246 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 CENPVQ7Z7K6 275 aaPredicted RBP9.88□□□□□ -0.83
SRPRA-202ENST00000527817 FOXRED1Q96CU9 486 aaPredicted RBP9.88□□□□□ -0.83
SRPRA-202ENST00000527817 ATP6V1G3Q96LB4 118 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 FGF23Q9GZV9 251 aaPredicted RBP9.88□□□□□ -0.83
SRPRA-202ENST00000527817 OR10A2Q9H208 303 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 RGCCQ9H4X1 137 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 YY1AP1Q9H869 796 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 ZNF319Q9P2F9 582 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 U3KQK5 164 aa9.88□□□□□ -0.83
SRPRA-202ENST00000527817 H3BUI4 141 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 DIRAS1O95057 198 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 SPARCP09486 303 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 COX7A1P24310 79 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 HOXD3P31249 432 aaPredicted RBP9.87□□□□□ -0.83
SRPRA-202ENST00000527817 CAPZA1P52907 286 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 SSX2Q16385 188 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 PLA1AQ53H76 456 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 CCDC121Q6ZUS5 278 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 KCTD8Q6ZWB6 473 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 FAM57BQ71RH2 274 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 KRT74Q7RTS7 529 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 TIGD4Q8IY51 512 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 FAM86B1Q8N7N1 296 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 ZNF511Q8NB15 262 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 OR51L1Q8NGJ5 315 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 OR2T27Q8NH04 317 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 ZNF671Q8TAW3 534 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 PIGCQ92535 297 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 FAM162AQ96A26 154 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 HOPXQ9BPY8 73 aaPredicted RBP9.87□□□□□ -0.83
SRPRA-202ENST00000527817 RASL12Q9NYN1 266 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 USE1Q9NZ43 259 aa9.87□□□□□ -0.83
SRPRA-202ENST00000527817 DNAH7Q8WXX0 4024 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 DYNC2H1Q8NCM8 4307 aaKnown RBP9.86□□□□□ -0.83
SRPRA-202ENST00000527817 C17orf98A8MV24 154 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 FAM90A22PA8MWA6 464 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 ODF3BA8MYP8 253 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 NME4O00746 187 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 MTRF1O75570 445 aaKnown RBP9.86□□□□□ -0.83
SRPRA-202ENST00000527817 GADD45GO95257 159 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 CLIC3O95833 236 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 ACKR3P25106 362 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 HSD11B1P28845 292 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 IFNGR2P38484 337 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 ZNF121P58317 390 aaPredicted RBP9.86□□□□□ -0.83
SRPRA-202ENST00000527817 TSPAN31Q12999 210 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 TMEM95Q3KNT9 176 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 LDLRAD2Q5SZI1 272 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 RNF144BQ7Z419 303 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 THAP5Q7Z6K1 395 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 ZNF561Q8N587 486 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 LINC00482Q8N8I6 264 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 OR11H6Q8NGC7 330 aa9.86□□□□□ -0.83
SRPRA-202ENST00000527817 OR13D1Q8NGV5 346 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms