RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 OR56B2PQ8NGI1 322 aa9.16□□□□□ -0.94
NEDD8-204ENST00000526430 RGP1Q92546 391 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-204ENST00000526430 SLC25A28Q96A46 364 aa9.16□□□□□ -0.94
NEDD8-204ENST00000526430 YTHDF1Q9BYJ9 559 aaKnown RBP9.16□□□□□ -0.94
NEDD8-204ENST00000526430 GPR84Q9NQS5 396 aa9.16□□□□□ -0.94
NEDD8-204ENST00000526430 SCN3BQ9NY72 215 aa9.16□□□□□ -0.94
NEDD8-204ENST00000526430 V9GYS6 101 aa9.16□□□□□ -0.94
NEDD8-204ENST00000526430 C17orf100A8MU93 164 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 VSTM5A8MXK1 200 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 WNT9BO14905 357 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 ZFPL1O95159 310 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 HLA-DPB1P04440 258 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 ISG15P05161 165 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 MAP2K4P45985 399 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 TMEM33P57088 247 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 RPS11P62280 158 aaKnown RBP eCLIP9.15□□□□□ -0.94
NEDD8-204ENST00000526430 ACTA2P62736 377 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 ACTG2P63267 376 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 ACSM1Q08AH1 577 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 MAB21L1Q13394 359 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 ASPHD2Q6ICH7 369 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 KLBQ86Z14 1044 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 KLHL36Q8N4N3 616 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 C22orf15Q8WYQ4 148 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 MYDGFQ969H8 173 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 PGLYRP3Q96LB9 341 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 PDCD1LG2Q9BQ51 273 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 OR10A2Q9H208 303 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 RGCCQ9H4X1 137 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 NARFLQ9H6Q4 476 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 SP140LQ9H930 580 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 DYNLRB1Q9NP97 96 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 RHBDD3Q9Y3P4 386 aa9.15□□□□□ -0.94
NEDD8-204ENST00000526430 M0R233 179 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 RGS10O43665 173 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 HPXP02790 462 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 MT-ND5P03915 603 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 CD55P08174 381 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 COL8A2P25067 703 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 PMELP40967 661 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 WNT4P56705 351 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 MRPS11P82912 194 aaKnown RBP9.14□□□□□ -0.95
NEDD8-204ENST00000526430 EMX1Q04741 257 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-204ENST00000526430 MALLQ13021 153 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 CDK5R1Q15078 307 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 TIGD6Q17RP2 521 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 ODF4Q2M2E3 257 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 CCDC58Q4VC31 144 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 DMRTC1Q5HYR2 192 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 VAX1Q5SQQ9 334 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 KPRPQ5T749 579 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-204ENST00000526430 DCAF12L2Q5VW00 463 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 TMEM42Q69YG0 159 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 CRIP3Q6Q6R5 217 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 C17orf107Q6ZR85 190 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 MRPL21Q7Z2W9 205 aaKnown RBP9.14□□□□□ -0.95
NEDD8-204ENST00000526430 REC114Q7Z4M0 266 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 WDR86Q86TI4 376 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 C11orf53Q8IXP5 236 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 SPARTQ8N0X7 666 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 ZFP41Q8N8Y5 198 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 BHLHE23Q8NDY6 225 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 OR51A4Q8NGJ6 313 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 TMIGD2Q96BF3 282 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 DUX5Q96PT3 197 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 TPK1Q9H3S4 243 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 MS4A5Q9H3V2 200 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 Q9H521 79 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 MOB1AQ9H8S9 216 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 NKIRAS2Q9NYR9 191 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 OPN4Q9UHM6 478 aa9.14□□□□□ -0.95
NEDD8-204ENST00000526430 A0A1W2PPW3 197 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 A6NIN4 97 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 H3BSH0 61 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 SPRY3O43610 288 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 PLPP2O43688 288 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 TIMM8AO60220 97 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-204ENST00000526430 DHRS3O75911 302 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 PTBP3O95758 552 aaKnown RBP9.13□□□□□ -0.95
NEDD8-204ENST00000526430 CST4P01036 141 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 KNG1P01042 644 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 VSIG8P0DPA2 414 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 SELEP16581 610 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 MYL12AP19105 171 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 CA6P23280 308 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 DDOSTP39656 456 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 ZNF81P51508 661 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 GBX2P52951 348 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-204ENST00000526430 GABARAPL2P60520 117 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 CCL8P80075 99 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 SRSF4Q08170 494 aaKnown RBP9.13□□□□□ -0.95
NEDD8-204ENST00000526430 BAMBIQ13145 260 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 GFOD2Q3B7J2 385 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 BEAN1Q3B7T3 259 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 BCL2L15Q5TBC7 163 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 RPL22L1Q6P5R6 122 aaKnown RBP9.13□□□□□ -0.95
NEDD8-204ENST00000526430 TMPRSS11AQ6ZMR5 421 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 RDH5Q92781 318 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 YIPF5Q969M3 257 aa9.13□□□□□ -0.95
NEDD8-204ENST00000526430 ADAT3Q96EY9 351 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms