RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 FTCDNL1E5RQL4 147 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 TSPAN2O60636 221 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 MT-ATP6P00846 226 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 GIMD1P0DJR0 217 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 CD37P11049 281 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 GABRG2P18507 467 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 GSK3AP49840 483 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 TAS2R31P59538 309 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 DEFB133Q30KQ1 61 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 FAM69BQ5VUD6 431 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 KCNK17Q96T54 332 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 LHFPL6Q9Y693 200 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 URGCP-MRPS24S4R325 110 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 ZNF814B7Z6K7 855 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 GPR37O15354 613 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 PRH1P02810 166 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 HPNP05981 417 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 SLC6A9P48067 706 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 SULT1A2P50226 295 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 MMP16P51512 607 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 FXYD4P59646 89 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 NUP54Q7Z3B4 507 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 C5orf24Q7Z6I8 188 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 OIT3Q8WWZ8 545 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 SGK3Q96BR1 496 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 ZNF251Q9BRH9 671 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 ABHD14AQ9BUJ0 271 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 LIME1Q9H400 295 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 CUTCQ9NTM9 273 aa11.6□□□□□ -0.55
CAPN1-202ENST00000524773 ZNF107Q9UII5 783 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-202ENST00000524773 STMND1H3BQB6 276 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 DVL1P1P54792 670 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-202ENST00000524773 S100A12P80511 92 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 CHAF1BQ13112 559 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 C14orf28Q4W4Y0 310 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 GRINAQ7Z429 371 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 SKA3Q8IX90 412 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 PTX4Q96A99 478 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 ZNF2Q9BSG1 426 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-202ENST00000524773 MCTS1Q9ULC4 181 aaKnown RBP11.59□□□□□ -0.55
CAPN1-202ENST00000524773 SHANK1Q9Y566 2161 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 SPTY2D1-AS1A0A0U1RR47 76 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 CCDC85CA6NKD9 419 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 MFNGO00587 321 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 UBE2CO00762 179 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 EFNA2O43921 213 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 NXPH3O95157 252 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 FBP1P09467 338 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 HOXB1P14653 301 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-202ENST00000524773 PPP1CCP36873 323 aaKnown RBP11.59□□□□□ -0.55
CAPN1-202ENST00000524773 NHLH2Q02577 135 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 FOXF1Q12946 379 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 GUK1Q16774 197 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 CHRFAM7AQ494W8 412 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 TMEM268Q5VZI3 342 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 OR9K2Q8NGE7 335 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 LMX1AQ8TE12 382 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 SLAMF9Q96A28 289 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 TCTN2Q96GX1 697 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 GPHA2Q96T91 129 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 CNTNAP3Q9BZ76 1288 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.59□□□□□ -0.55
CAPN1-202ENST00000524773 B3GALT1Q9Y5Z6 326 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 CPAMD8Q8IZJ3 1885 aa11.59□□□□□ -0.55
CAPN1-202ENST00000524773 UMAD1C9J7I0 102 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 F5H5K5 113 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 MASP2O00187 686 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 RAB5AP20339 215 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 FPR2P25090 351 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 MPZP25189 248 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 GABRA4P48169 554 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 PHLDA2Q53GA4 152 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 GGNBP1Q5YKI7 109 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 ZNF343Q6P1L6 599 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 OSGIN2Q9Y236 505 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 TIMM10BQ9Y5J6 103 aa11.58□□□□□ -0.55
CAPN1-202ENST00000524773 ANGPTL7O43827 346 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 JMJD7P0C870 316 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 FAHP16930 419 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 SFTPDP35247 375 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 RBMXP38159 391 aaKnown RBP11.58□□□□□ -0.56
CAPN1-202ENST00000524773 CAPZBP47756 277 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 C5orf46Q6UWT4 87 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 Q6ZS52 159 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 H1FNTQ75WM6 255 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-202ENST00000524773 TMEM156Q8N614 296 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 C15orf54Q8N8G6 183 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 SAT2Q96F10 170 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-202ENST00000524773 TPSD1Q9BZJ3 242 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 SRPK3Q9UPE1 567 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 NCOA6Q14686 2063 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-202ENST00000524773 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 SMIM6P0DI80 62 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 LAP3P28838 519 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 CAMLGP49069 296 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 SULT1A1P50225 295 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 IL15RAQ13261 267 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 PLXDC2Q6UX71 529 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 ZNF283Q8N7M2 679 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 OR10A2Q9H208 303 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms