RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 ZBED3Q96IU2 234 aaPredicted RBP2.07□□□□□ -2.08
PCM1-219ENST00000523540 CSPG4P5Q96PW8 444 aa2.07□□□□□ -2.08
PCM1-219ENST00000523540 DAZ1Q9NQZ3 744 aaKnown RBP2.07□□□□□ -2.08
PCM1-219ENST00000523540 OR51B2Q9Y5P1 312 aa2.07□□□□□ -2.08
PCM1-219ENST00000523540 LOC102724200A0A096LPH7 203 aaPredicted RBP2.06□□□□□ -2.08
PCM1-219ENST00000523540 SLC22A20A6NK97 555 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 FARS2O95363 451 aaKnown RBP2.06□□□□□ -2.08
PCM1-219ENST00000523540 MPIP34949 423 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 MAGEA1P43355 309 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 TGM4P49221 684 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 RPL18AQ02543 176 aaKnown RBP2.06□□□□□ -2.08
PCM1-219ENST00000523540 FAM104BQ5XKR9 115 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 NDUFAF7Q7L592 441 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 LRP11Q86VZ4 500 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 WDR31Q8NA23 367 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 SFXN5Q8TD22 340 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 NAT6Q93015 286 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 SNF8Q96H20 258 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 NAPGQ99747 312 aaPredicted RBP2.06□□□□□ -2.08
PCM1-219ENST00000523540 TM2D3Q9BRN9 247 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 MS4A8Q9BY19 250 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 CLSTN2Q9H4D0 955 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 FANCEQ9HB96 536 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 ZNF586Q9NXT0 402 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 HMGXB4Q9UGU5 601 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 CES1P1Q9UKY3 287 aa2.06□□□□□ -2.08
PCM1-219ENST00000523540 NDRG2Q9UN36 371 aaKnown RBP2.06□□□□□ -2.08
PCM1-219ENST00000523540 IGHV6-1A0A0B4J1U7 121 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 C4orf51C9J302 202 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 H3BN98 237 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 MYL12BO14950 172 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 UPK1BO75841 260 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 KLHL2O95198 593 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 IGLV6-57P01721 117 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 PRSS3P35030 304 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 ERFP50548 548 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 CLDN6P56747 220 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 ZFAND6Q6FIF0 208 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 RNF10Q8N5U6 811 aaKnown RBP2.05□□□□□ -2.08
PCM1-219ENST00000523540 LINC00469Q8N7U9 141 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 OR52K2Q8NGK3 314 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 OR1S1Q8NH92 325 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 GPX8Q8TED1 209 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 ZCCHC13Q8WW36 166 aaKnown RBP2.05□□□□□ -2.08
PCM1-219ENST00000523540 ISOC2Q96AB3 205 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 MRPL48Q96GC5 212 aaKnown RBP2.05□□□□□ -2.08
PCM1-219ENST00000523540 TMEM175Q9BSA9 504 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 CHMP4BQ9H444 224 aaKnown RBP2.05□□□□□ -2.08
PCM1-219ENST00000523540 C8orf33Q9H7E9 229 aaPredicted RBP2.05□□□□□ -2.08
PCM1-219ENST00000523540 ZNF230Q9UIE0 474 aaPredicted RBP2.05□□□□□ -2.08
PCM1-219ENST00000523540 VAX2Q9UIW0 290 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 DDX19BQ9UMR2 479 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 JCADQ9P266 1359 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 NLRC5Q86WI3 1866 aa2.05□□□□□ -2.08
PCM1-219ENST00000523540 TMEM72A0PK05 275 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 GOLGA8JA6NMD2 632 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 HMMRO75330 724 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 HSBP1O75506 76 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 IGHV1-46P01743 117 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 GOLGA8HP0CJ92 632 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 ZNF35P13682 527 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 HRES1P13985 223 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 HLA-DMAP28067 261 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
PCM1-219ENST00000523540 YWHAEP62258 255 aaKnown RBP2.04□□□□□ -2.08
PCM1-219ENST00000523540 CACNA1DQ01668 2161 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 TPRG1LQ5T0D9 272 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 HHATQ5VTY9 493 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 PLCXD3Q63HM9 321 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 FAM131AQ6UXB0 335 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 ANGPTL8Q6UXH0 198 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 TRAM1L1Q8N609 369 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 OR2M7Q8NG81 312 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 IQCGQ9H095 443 aaKnown RBP2.04□□□□□ -2.08
PCM1-219ENST00000523540 ARV1Q9H2C2 271 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 OR51B5Q9H339 312 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 TMEM100Q9NV29 134 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 ZNF492Q9P255 531 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 RAB22AQ9UL26 194 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 PPIL1Q9Y3C6 166 aa2.04□□□□□ -2.08
PCM1-219ENST00000523540 GOLGA6L4A6NEF3 574 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 HACD1B0YJ81 288 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 AKR7A2O43488 359 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 TTC4O95801 387 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 DEKP35659 375 aaKnown RBP2.03□□□□□ -2.08
PCM1-219ENST00000523540 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 RAB11AP62491 216 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 IHHQ14623 411 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 TSC22D1Q15714 1073 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 RAB11BQ15907 218 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 KLHL40Q2TBA0 621 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 ZCCHC24Q8N2G6 241 aaKnown RBP2.03□□□□□ -2.08
PCM1-219ENST00000523540 OTUD6BQ8N6M0 293 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 BBOF1Q8ND07 529 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 OR10Z1Q8NGY1 313 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 TBL1XR1Q9BZK7 514 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 TRIM45Q9H8W5 580 aaPredicted RBP2.03□□□□□ -2.08
PCM1-219ENST00000523540 SND1-IT1Q9HBX3 110 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 ZNF302Q9NR11 478 aa2.03□□□□□ -2.08
PCM1-219ENST00000523540 TAS2R1Q9NYW7 299 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms