RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CASC10Q5T4H9 136 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 OR2T27Q8NH04 317 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 ZNRF4Q8WWF5 429 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 PIGCQ92535 297 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 SGK3Q96BR1 496 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 RNF170Q96K19 258 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 PRR25Q96S07 402 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 KCNJ15Q99712 375 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 OR52D1Q9H346 318 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 PITPNC1Q9UKF7 332 aa9.34□□□□□ -0.91
SDCBP-211ENST00000523441 IGKV1D-17A0A075B6S4 117 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 CXCR6O00574 342 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 ALDOBP05062 364 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 LPLP06858 475 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 NHLRC4P0CG21 123 aaPredicted RBP9.33□□□□□ -0.92
SDCBP-211ENST00000523441 PSG2P11465 335 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 DDOSTP39656 456 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 RPL31P62899 125 aaKnown RBP9.33□□□□□ -0.92
SDCBP-211ENST00000523441 CBX1P83916 185 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 IL5RAQ01344 420 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF273Q14593 569 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 TMEM200BQ69YZ2 307 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 ZBTB46Q86UZ6 589 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 MRPL41Q8IXM3 137 aaKnown RBP9.33□□□□□ -0.92
SDCBP-211ENST00000523441 LINC00482Q8N8I6 264 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 OR4X2Q8NGF9 303 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 OR4C15Q8NGM1 316 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 TLCD1Q96CP7 247 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 DNTTIP1Q9H147 329 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 C1orf21Q9H246 121 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 OPA3Q9H6K4 179 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 TMBIM4Q9HC24 238 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 PALMDQ9NP74 551 aa9.33□□□□□ -0.92
SDCBP-211ENST00000523441 FAM32AQ9Y421 112 aaKnown RBP9.33□□□□□ -0.92
SDCBP-211ENST00000523441 GYPBP06028 91 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 NCK1P16333 377 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 GPM6AP51674 278 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 EIF2B1Q14232 305 aaKnown RBP9.32□□□□□ -0.92
SDCBP-211ENST00000523441 ABCA11PQ4W5N1 156 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 NKAPLQ5M9Q1 402 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 LDLRAD2Q5SZI1 272 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 ZFAND6Q6FIF0 208 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 UNQ9370/PRO34162Q6UXP9 181 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 C18orf65Q6ZTR6 163 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 TIGD4Q8IY51 512 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF511Q8NB15 262 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 OR10Z1Q8NGY1 313 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 MUC7Q8TAX7 377 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 NDNFQ8TB73 568 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 FAM162AQ96A26 154 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 PGAM5Q96HS1 289 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF488Q96MN9 340 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 DUX3Q96PT4 197 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 KRTAP17-1Q9BYP8 105 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 FGF23Q9GZV9 251 aaPredicted RBP9.32□□□□□ -0.92
SDCBP-211ENST00000523441 KRCC1Q9NPI7 259 aaPredicted RBP9.32□□□□□ -0.92
SDCBP-211ENST00000523441 USE1Q9NZ43 259 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 OR14J1Q9UGF5 321 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 ENPP4Q9Y6X5 453 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 V9GYQ6 96 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 STAB2Q8WWQ8 2551 aa9.32□□□□□ -0.92
SDCBP-211ENST00000523441 hCG_38984A0A1B0GV85 526 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 hCG_1809904A0A1W2PP81 198 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 A0A1W2PPE2 198 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 A0A1W2PPH5 198 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 A0A1W2PR64 198 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 A0A1W2PRV1 198 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 NUDT19A8MXV4 375 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF878C9JN71 531 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF593O00488 134 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-211ENST00000523441 OTX1P32242 354 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-211ENST00000523441 SLC25A1P53007 311 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 OR12D2P58182 307 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF121P58317 390 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-211ENST00000523441 DGCR2P98153 550 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 DCTN2Q13561 401 aaKnown RBP9.31□□□□□ -0.92
SDCBP-211ENST00000523441 KLHL12Q53G59 568 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 CEP78Q5JTW2 689 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 KCTD18Q6PI47 426 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-211ENST00000523441 MEPCEQ7L2J0 689 aaKnown RBP9.31□□□□□ -0.92
SDCBP-211ENST00000523441 THAP5Q7Z6K1 395 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 OR6K6Q8NGW6 343 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 OR5K1Q8NHB7 308 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 TSPEARQ8WU66 669 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 CAPSLQ8WWF8 208 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 OR5P3Q8WZ94 311 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 FOXRED1Q96CU9 486 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-211ENST00000523441 HIST1H2AAQ96QV6 131 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 GPR61Q9BZJ8 451 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 TLNRD1Q9H1K6 362 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF319Q9P2F9 582 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 KCNG2Q9UJ96 466 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 COMMD3-BMI1R4GMX3 469 aa9.31□□□□□ -0.92
SDCBP-211ENST00000523441 HUWE1Q7Z6Z7 4374 aaKnown RBP9.3□□□□□ -0.92
SDCBP-211ENST00000523441 RFPL4AA6NLU0 287 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 VGLL3A8MV65 326 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF732B4DXR9 585 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 RFPL4AL1F8VTS6 287 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 ENTPD1P49961 510 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 SPIBQ01892 262 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms