RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	CENPX	A8MT69	81 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	HIDE1	A8MVS5	230 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	C21orf140	B9A014	251 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	TMX2-CTNND1	H3BSU7	103 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298		K7ENP7	123 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	PSMD12	O00232	456 aa	Predicted RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	DFFA	O00273	331 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SULT1C2	O00338	296 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	OR7A17	O14581	309 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	AZIN1	O14977	448 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SLC31A1	O15431	190 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	MGRN1	O60291	552 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	HSBP1	O75506	76 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	HLA-H	P01893	362 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	KLK1	P06870	262 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298		P0C879	139 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SMIM6	P0DI80	62 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	ZNF35	P13682	527 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	CD1E	P15812	388 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	KLK2	P20151	261 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	FUT3	P21217	361 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	F8A1	P23610	371 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	PRDX3	P30048	256 aa	Known RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	NBL1	P41271	181 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	GPR1	P46091	355 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	XCR1	P46094	333 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	GNPDA1	P46926	289 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	PPOX	P50336	477 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	EFNB2	P52799	333 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	UBE2M	P61081	183 aa	Known RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	RPS15A	P62244	130 aa	Known RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	EWSR1	Q01844	656 aa	Known RBP eCLIP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	RELA	Q04206	551 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	GRB7	Q14451	532 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	MAD2L1BP	Q15013	274 aa	Predicted RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	POU2AF1	Q16633	256 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	DGUOK	Q16854	277 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SDHAF4	Q5VUM1	108 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	FAHD1	Q6P587	224 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	DRAM2	Q6UX65	266 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298		Q6ZSR3	168 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	TMEM179	Q6ZVK1	233 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SSX7	Q7RTT5	188 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	OR2W3	Q7Z3T1	314 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	TMED4	Q7Z7H5	227 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	ACOT1	Q86TX2	421 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	TMEM135	Q86UB9	458 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	ERI1	Q8IV48	349 aa	Known RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	CEND1	Q8N111	149 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	LGI3	Q8N145	548 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	CLDN19	Q8N6F1	224 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	HSD17B11	Q8NBQ5	300 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	TMEM161B	Q8NDZ6	487 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	LFNG	Q8NES3	379 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	OR4F6	Q8NGB9	312 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	OR52I1	Q8NGK6	324 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	OR6K3	Q8NGY3	331 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	OR51A7	Q8NH64	312 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	OR5AK3P	Q8NH89	298 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	MAGEE2	Q8TD90	523 aa	Predicted RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	BAALC	Q8WXS3	180 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	RORB	Q92753	470 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	FLYWCH2	Q96CP2	140 aa	Known RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	TLCD1	Q96CP7	247 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	MS4A14	Q96JA4	679 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	PFDN5	Q99471	154 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	ECSIT	Q9BQ95	431 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	KIFC1	Q9BW19	673 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	MRPS26	Q9BYN8	205 aa	Known RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	NAA50	Q9GZZ1	169 aa	Known RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	UGT1A8	Q9HAW9	530 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	ZC4H2	Q9NQZ6	224 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SLC2A9	Q9NRM0	540 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	FGFR1OP2	Q9NVK5	253 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	ZNF225	Q9UK10	706 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	RNF6	Q9Y252	685 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	GOLT1B	Q9Y3E0	138 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	USH1C	Q9Y6N9	552 aa		3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	PRRC2A	P48634	2157 aa	Known RBP	3.29	□□□□□ -1.88
CTNNA1-238	ENST00000523298	BCL9L	Q86UU0	1499 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	ATRN	O75882	1429 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	RGPD1	P0DJD0	1748 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	TOGARAM1	Q9Y4F4	1720 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	TRBV9	A0A0B4J1U6	114 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SLC22A20	A6NK97	555 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298		K7EN84	100 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	DCTN6	O00399	190 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	KPNA4	O00629	521 aa	Predicted RBP	3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	PFDN6	O15212	129 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SLC22A1	O15245	554 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	FGF16	O43320	207 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	PRKAB2	O43741	272 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SHOX2	O60902	331 aa	Predicted RBP	3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	TDP2	O95551	362 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	CD160	O95971	181 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298		P04436	131 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	C2	P06681	752 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	CSNK2A2	P19784	350 aa	Predicted RBP	3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	SLC6A1	P30531	599 aa		3.28	□□□□□ -1.88
CTNNA1-238	ENST00000523298	GNRHR	P30968	328 aa		3.28	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms