RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 SHFQ7M4L6 423 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 BATF2Q8N1L9 274 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 ZNRF1Q8ND25 227 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 BBS1Q8NFJ9 593 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 ANGPTL6Q8NI99 470 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 FEVQ99581 238 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 DGCR6LQ9BY27 220 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 C16orf95Q9H693 158 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 NLKQ9UBE8 527 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 FOXJ3Q9UPW0 622 aa12.61□□□□□ -0.39
MRPS28-209ENST00000522987 OR2AT4A6NND4 320 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 B2RBV5 119 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 CSF1P09603 554 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 GLRA1P23415 457 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 CAPZA1P52907 286 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 GNGT1P63211 74 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 METAP1DQ6UB28 335 aaPredicted RBP12.6□□□□□ -0.39
MRPS28-209ENST00000522987 TMEM179BQ7Z7N9 219 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 ZDHHC23Q8IYP9 409 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 LYG1Q8N1E2 194 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 PPP1R35Q8TAP8 253 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 FAM81AQ8TBF8 368 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 C12orf43Q96C57 262 aaKnown RBP12.6□□□□□ -0.39
MRPS28-209ENST00000522987 ZNF488Q96MN9 340 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 YY1AP1Q9H869 796 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 ARL2BPQ9Y2Y0 163 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 MPC1Q9Y5U8 109 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 DSCAML1Q8TD84 2053 aa12.6□□□□□ -0.39
MRPS28-209ENST00000522987 IGKV1D-17A0A075B6S4 117 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 ZNF732B4DXR9 585 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 PRR23D1E9PI22 279 aaPredicted RBP12.59□□□□□ -0.39
MRPS28-209ENST00000522987 G3V4G9 280 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 H0YAE9 185 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 SIGLEC5O15389 551 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 TSPAN9O75954 239 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 ACAA1P09110 424 aaPredicted RBP12.59□□□□□ -0.39
MRPS28-209ENST00000522987 PRR23D2P0DMB1 279 aaPredicted RBP12.59□□□□□ -0.39
MRPS28-209ENST00000522987 GABRA5P31644 462 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 DCTDP32321 178 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 TGFBR2P37173 567 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 CEBPDP49716 269 aaPredicted RBP12.59□□□□□ -0.39
MRPS28-209ENST00000522987 ERVFRD-1P60508 538 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 RPS7P62081 194 aaKnown RBP12.59□□□□□ -0.39
MRPS28-209ENST00000522987 GINS1Q14691 196 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 C2orf68Q2NKX9 166 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 C11orf91Q3C1V1 193 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 FAM98BQ52LJ0 330 aaKnown RBP12.59□□□□□ -0.39
MRPS28-209ENST00000522987 PLA1AQ53H76 456 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 ATPAF1Q5TC12 328 aaPredicted RBP12.59□□□□□ -0.39
MRPS28-209ENST00000522987 HCP5Q6MZN7 132 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 COMMD2Q86X83 199 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 DHFR2Q86XF0 187 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 HS3ST5Q8IZT8 346 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 FTMTQ8N4E7 242 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 OR10Z1Q8NGY1 313 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 OTOSQ8NHW6 89 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 C8orf46Q8TAG6 207 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 GIPC3Q8TF64 312 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 CCDC124Q96CT7 223 aaKnown RBP12.59□□□□□ -0.39
MRPS28-209ENST00000522987 MED30Q96HR3 178 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 HIST1H2AAQ96QV6 131 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 SSX3Q99909 188 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 NDE1Q9NXR1 346 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 LRP12Q9Y561 859 aa12.59□□□□□ -0.39
MRPS28-209ENST00000522987 MEX3AA1L020 520 aaKnown RBP12.58□□□□□ -0.4
MRPS28-209ENST00000522987 TMEM210A6NLX4 147 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 GPR37O15354 613 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 CST4P01036 141 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 MRPL3P09001 348 aaKnown RBP12.58□□□□□ -0.4
MRPS28-209ENST00000522987 PSG2P11465 335 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 PAICSP22234 425 aaKnown RBP12.58□□□□□ -0.4
MRPS28-209ENST00000522987 COX7A1P24310 79 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 UBE2E1P51965 193 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 PSMA6P60900 246 aaKnown RBP12.58□□□□□ -0.4
MRPS28-209ENST00000522987 TMEM236Q5W0B7 351 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 LCN8Q6JVE9 175 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 MOB3CQ70IA8 216 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 KRT77Q7Z794 578 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 CPOQ8IVL8 374 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 MKXQ8IYA7 352 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 OR51G2Q8NGK0 314 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 NPRL2Q8WTW4 380 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 PPP1R14AQ96A00 147 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 CLPTM1LQ96KA5 538 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 NKX3-1Q99801 234 aaPredicted RBP12.58□□□□□ -0.4
MRPS28-209ENST00000522987 MAGIXQ9H6Y5 334 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 METTL8Q9H825 291 aaKnown RBP12.58□□□□□ -0.4
MRPS28-209ENST00000522987 C19orf12Q9NSK7 152 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 MAB21L2Q9Y586 359 aa12.58□□□□□ -0.4
MRPS28-209ENST00000522987 DCTN3O75935 186 aa12.57□□□□□ -0.4
MRPS28-209ENST00000522987 CST1P01037 141 aa12.57□□□□□ -0.4
MRPS28-209ENST00000522987 BMXP51813 675 aa12.57□□□□□ -0.4
MRPS28-209ENST00000522987 BLMHQ13867 455 aa12.57□□□□□ -0.4
MRPS28-209ENST00000522987 NCR3LG1Q68D85 454 aa12.57□□□□□ -0.4
MRPS28-209ENST00000522987 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
MRPS28-209ENST00000522987 OR4M1Q8NGD0 313 aa12.57□□□□□ -0.4
MRPS28-209ENST00000522987 OR5R1Q8NH85 324 aa12.57□□□□□ -0.4
MRPS28-209ENST00000522987 DNTTIP1Q9H147 329 aa12.57□□□□□ -0.4
MRPS28-209ENST00000522987 RGCCQ9H4X1 137 aa12.57□□□□□ -0.4
MRPS28-209ENST00000522987 NIPAL2Q9H841 368 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms