RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 KCTD21Q4G0X4 260 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 ULK3Q6PHR2 472 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 RASSF6Q6ZTQ3 369 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 UEVLDQ8IX04 471 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 ATG16L2Q8NAA4 619 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 ADPRHL1Q8NDY3 354 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF555Q8NEP9 628 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 OR4S1Q8NGB4 309 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 OR4K5Q8NGD3 323 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 RHOXF1Q8NHV9 184 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 GNPDA2Q8TDQ7 276 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 WIPF2Q8TF74 440 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-210ENST00000522843 LHX4Q969G2 390 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 R3HDM4Q96D70 268 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 PPA2Q9H2U2 334 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 C1orf198Q9H425 327 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 RNF121Q9H920 327 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF556Q9HAH1 456 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 B3GAT2Q9NPZ5 323 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 BATF3Q9NR55 127 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 PAPOLBQ9NRJ5 636 aaKnown RBP5.39□□□□□ -1.55
SDCBP-210ENST00000522843 CYSLTR2Q9NS75 346 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 KRT84Q9NSB2 600 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 PLCXD1Q9NUJ7 323 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 IL20Q9NYY1 176 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 ZNRD1Q9P1U0 126 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 CTSZQ9UBR2 303 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 PPP1R3CQ9UQK1 317 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF785A8K8V0 405 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 OR10H3O60404 316 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 MPZL2O60487 215 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 MITFO75030 526 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 TNFAIP8O95379 198 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 BGLAPP02818 100 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 GNAO1P09471 354 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 TSPAN19P0C672 248 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 CCDC159P0C7I6 412 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 GABRB1P18505 474 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 CPT2P23786 658 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 STOMP27105 288 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 GTF2E2P29084 291 aaKnown RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 HOXD3P31249 432 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 GGT2P36268 569 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 POLR2IP36954 125 aaKnown RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 LIPAP38571 399 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 PMELP40967 661 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 KIR2DS4P43632 304 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 BIDP55957 195 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 SNRPGP62308 76 aaKnown RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 PRB3Q04118 309 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 EGFEM1PQ0D2K5 195 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 PTGES3Q15185 160 aaKnown RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 PABPC1L2AQ5JQF8 200 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 RBM48Q5RL73 367 aaKnown RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 C6orf141Q5SZD1 244 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 FAM69AQ5T7M9 428 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 LAIR2Q6ISS4 152 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 TMEM53Q6P2H8 277 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 SLC16A14Q7RTX9 510 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 NKAIN4Q8IVV8 208 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 C8orf59Q8N0T1 100 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 AQP11Q8NBQ7 271 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 SETD9Q8NE22 299 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 C19orf18Q8NEA5 215 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 OR2Z1Q8NG97 314 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 OR8B3Q8NGG8 313 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 OR1J2Q8NGS2 313 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 OR6S1Q8NH40 331 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 OR52J3Q8NH60 311 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 VANGL1Q8TAA9 524 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 MUC7Q8TAX7 377 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 HDAC2Q92769 488 aaKnown RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 WDFY2Q96P53 400 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 OR2V2Q96R30 315 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 OR8B2Q96RD0 313 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 CITED2Q99967 270 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-210ENST00000522843 APOL4Q9BPW4 351 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 NIPSNAP1Q9BPW8 284 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 TMEM43Q9BTV4 400 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 DPAGT1Q9H3H5 408 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 DUSP21Q9H596 190 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 GLTPQ9NZD2 209 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 CLN8Q9UBY8 286 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 MIOXQ9UGB7 285 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 TMEM5Q9Y2B1 443 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 DNAH10Q8IVF4 4471 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 ALMS1Q8TCU4 4167 aa5.38□□□□□ -1.55
SDCBP-210ENST00000522843 TRAV36DV7A0A075B6V5 113 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 IGHV3-64DA0A0J9YX35 117 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 IQCMA0A1B0GVH7 501 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 A0A1B0GWA3 101 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 C5orf49A4QMS7 147 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 LINC00473A8K010 186 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 PLPP3O14495 311 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 PHYHO14832 338 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 ENSAO43768 121 aaKnown RBP5.37□□□□□ -1.55
SDCBP-210ENST00000522843 OR2T1O43869 369 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 TIMM8AO60220 97 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms