RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 LFNGQ8NES3 379 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 ELOA3Q8NG57 546 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 MFSD8Q8NHS3 518 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 STAG3L4Q8TBR4 150 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 LGALS14Q8TCE9 139 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 RSPRY1Q96DX4 576 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 TVP23CQ96ET8 276 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 PERPQ96FX8 193 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 SEC22AQ96IW7 307 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 AQP10Q96PS8 301 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 OR11A1Q9GZK7 315 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 POPDC3Q9HBV1 291 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 MRPS16Q9Y3D3 137 aaKnown RBP7.36□□□□□ -1.23
HMGB4-204ENST00000522796 WDR45Q9Y484 360 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 WNT6Q9Y6F9 365 aa7.36□□□□□ -1.23
HMGB4-204ENST00000522796 HCRTO43612 131 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 RCBTB2O95199 551 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 ZNF205O95201 554 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 SOX14O95416 240 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 CDS2O95674 445 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 IGHA1P01876 353 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 FRKP42685 505 aaPredicted RBP7.35□□□□□ -1.23
HMGB4-204ENST00000522796 LTC4SQ16873 150 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 ACSM3Q53FZ2 586 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 ERASQ7Z444 233 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 KRTCAP2Q8N6L1 136 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 FER1L6-AS1Q8NA97 138 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 TSTD1Q8NFU3 115 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 RERGQ96A58 199 aaPredicted RBP7.35□□□□□ -1.23
HMGB4-204ENST00000522796 SEH1LQ96EE3 360 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 CHST6Q9GZX3 395 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 ZNF586Q9NXT0 402 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 HHLA1C9JL84 531 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 CLDN34H7C241 214 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 UTS2O95399 124 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 TIAF1O95411 115 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 GPR6P46095 362 aaPredicted RBP7.35□□□□□ -1.23
HMGB4-204ENST00000522796 GABRA2P47869 451 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 PSEN2P49810 448 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 HTR6P50406 440 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 PLP1P60201 277 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 SRPXP78539 464 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 CDK3Q00526 305 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 SRSF1Q07955 248 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGB4-204ENST00000522796 P2RY6Q15077 328 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 SLC8B1Q6J4K2 584 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 CEACAM19Q7Z692 300 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 SPNS2Q8IVW8 549 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 RYBPQ8N488 228 aaPredicted RBP7.35□□□□□ -1.23
HMGB4-204ENST00000522796 TMEM170AQ8WVE7 144 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 TMEM9BQ9NQ34 198 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 TRIM36Q9NQ86 728 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 NOP16Q9Y3C1 178 aaKnown RBP7.35□□□□□ -1.23
HMGB4-204ENST00000522796 WIPI2Q9Y4P8 454 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 OR51B2Q9Y5P1 312 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 LTBP3Q9NS15 1303 aa7.35□□□□□ -1.23
HMGB4-204ENST00000522796 IGSF23A1L1A6 192 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 NPIPB15A6NHN6 443 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 TMPRSS11DO60235 418 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 HLA-DQB2P05538 268 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 H1F0P07305 194 aaKnown RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 CHRM2P08172 466 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 RAB40ALP0C0E4 278 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 LYL1P12980 280 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 GNB3P16520 340 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 FUT3P21217 361 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 TSFMP43897 325 aaKnown RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 RGRP47804 291 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 TAS2R30P59541 319 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 BTN3A2P78410 334 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 ZNF791Q3KP31 576 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 TMEM69Q5SWH9 247 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 FAM27D1Q5T7N8 215 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 LEG1Q6P5S2 330 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 COX15Q7KZN9 410 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 AMIGO3Q86WK7 504 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 RNF152Q8N8N0 203 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 KISS1RQ969F8 398 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 GABRG3Q99928 467 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 TM7SF3Q9NS93 570 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 ZNF107Q9UII5 783 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 VPREB3Q9UKI3 123 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 FBXO4Q9UKT5 387 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 PTRH2Q9Y3E5 179 aaKnown RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 B3GALT1Q9Y5Z6 326 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 COL16A1Q07092 1604 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 PDCD11Q14690 1871 aaKnown RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 WDR90Q96KV7 1748 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 IGLV3-22A0A075B6J6 115 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 HSD17B6O14756 317 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 TNFRSF13BO14836 293 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 PRICKLE3O43900 615 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 CEACAM4O75871 244 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 AKAIN1P0CW23 69 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 CD27P26842 260 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 GABRA3P34903 492 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 PPICP45877 212 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 SLC25A1P53007 311 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 UBE2NP61088 152 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms