RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ZNF816-ZNF321PA0A0X1KG74 233 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 ZNF732B4DXR9 585 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 MAGEB4O15481 346 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-209ENST00000522243 RHBDL1O75783 438 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 EPHA2P29317 976 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 BNIP1Q12981 228 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 C11orf91Q3C1V1 193 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 CDONQ4KMG0 1287 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 LRRC10Q5BKY1 277 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 FAM76BQ5HYJ3 339 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 DEGS2Q6QHC5 323 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 MOB3CQ70IA8 216 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 TCEANCQ8N8B7 351 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 LY6G5BQ8NDX9 201 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 OR51E1Q8TCB6 317 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 CNN2Q99439 309 aaKnown RBP17.06■□□□□ 0.32
SDCBP-209ENST00000522243 GPR84Q9NQS5 396 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 KRT84Q9NSB2 600 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 KPTNQ9Y664 436 aa17.06■□□□□ 0.32
SDCBP-209ENST00000522243 A0A0U1RQK1 487 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 A0A0U1RQV5 110 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 NKX6-3A6NJ46 265 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 GLRA1P23415 457 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 DCTDP32321 178 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 RIDAP52758 137 aaKnown RBP17.05■□□□□ 0.32
SDCBP-209ENST00000522243 DLX1P56177 255 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 ESRRGP62508 458 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 MFGE8Q08431 387 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-209ENST00000522243 ATPAF1Q5TC12 328 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-209ENST00000522243 THAP5Q7Z6K1 395 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 ZNF679Q8IYX0 411 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 GAFA1Q96PS6 74 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 DCTN5Q9BTE1 182 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 SIRT7Q9NRC8 400 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 H2AFY2Q9P0M6 372 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-209ENST00000522243 GTF2A1LQ9UNN4 478 aa17.05■□□□□ 0.32
SDCBP-209ENST00000522243 A0A1B0GVI7 797 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 ACOD1A6NK06 481 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 POM121CA8CG34 1229 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 G3V2T6 193 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 ZNF254O75437 659 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 CRYBA1P05813 215 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 FAHP16930 419 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 GABRA2P47869 451 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 CXCR4P61073 352 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 GNG3P63215 75 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 ROM1Q03395 351 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 ATP6AP1Q15904 470 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 DGUOKQ16854 277 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 ZNF829Q3KNS6 432 aaPredicted RBP17.04■□□□□ 0.32
SDCBP-209ENST00000522243 ZNF788Q6ZQV5 615 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 PLEKHG7Q6ZR37 379 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 MEPCEQ7L2J0 689 aaKnown RBP17.04■□□□□ 0.32
SDCBP-209ENST00000522243 AMIGO2Q86SJ2 522 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 ANGPTL6Q8NI99 470 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 ASB17Q8WXJ9 295 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 IL4I1Q96RQ9 567 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 APOL4Q9BPW4 351 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 PRRG3Q9BZD7 231 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 OR51I2Q9H344 312 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 NLKQ9UBE8 527 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 TMEM14AQ9Y6G1 99 aa17.04■□□□□ 0.32
SDCBP-209ENST00000522243 A0A1W2PRD5 423 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 A0A1W2PRF3 423 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 A0A1W2PRM7 423 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 IGLV3-1P01715 115 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 NDUFB7P17568 137 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 RIPPLY1Q0D2K3 151 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 CEACAM21Q3KPI0 293 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 SLX4IPQ5VYV7 408 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 ZNF322Q6U7Q0 402 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-209ENST00000522243 SLC35F2Q8IXU6 374 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 SEMA6AQ9H2E6 1030 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 ADGRL4Q9HBW9 690 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 SLC25A10Q9UBX3 287 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-209ENST00000522243 PIGLQ9Y2B2 252 aa17.03■□□□□ 0.32
SDCBP-209ENST00000522243 OR2AT4A6NND4 320 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 ZAR1LA6NP61 321 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 GPR37O15354 613 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 IGHV4-59P01825 116 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 TTRP02766 147 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 EFNB1P98172 346 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 RELBQ01201 579 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 KLRD1Q13241 179 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 AADACL4Q5VUY2 407 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 NXNL2Q5VZ03 156 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 PLCXD3Q63HM9 321 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 C12orf73Q69YU5 71 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 HAGHLQ6PII5 290 aaPredicted RBP17.02■□□□□ 0.32
SDCBP-209ENST00000522243 CMTM4Q8IZR5 234 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 TMEM86BQ8N661 226 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 KIR3DL3Q8N743 410 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 Q8N7P7 452 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 TBC1D15Q8TC07 691 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 TMEM163Q8TC26 289 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 MED30Q96HR3 178 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 DNTTIP1Q9H147 329 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 ELL3Q9HB65 397 aaPredicted RBP17.02■□□□□ 0.32
SDCBP-209ENST00000522243 C1RLQ9NZP8 487 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms