RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CDONQ4KMG0 1287 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 WDR38Q5JTN6 314 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 ZNF841Q6ZN19 808 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 Q6ZSR3 168 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 MOB3CQ70IA8 216 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 DOK3Q7L591 496 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 PRSS35Q8N3Z0 413 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 TEX29Q8N6K0 151 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 ACBD7Q8N6N7 88 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 SCCPDHQ8NBX0 429 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 ZNF555Q8NEP9 628 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 APH1BQ8WW43 257 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 PCDHGB1Q9Y5G3 927 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 INSIG2Q9Y5U4 225 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 ZNF732B4DXR9 585 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 ADAM20O43506 726 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 NDUFA2O43678 99 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 GNG3P63215 75 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 GABPB1Q06547 395 aaPredicted RBP17.2■□□□□ 0.34
TRIM35-203ENST00000521253 PLCXD3Q63HM9 321 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 WDR25Q64LD2 544 aaPredicted RBP17.2■□□□□ 0.34
TRIM35-203ENST00000521253 TMEM42Q69YG0 159 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 C1QL2Q7Z5L3 287 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 PACRGLQ8N7B6 248 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 OR5A2Q8NGI9 324 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 SEH1LQ96EE3 360 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 OR51I2Q9H344 312 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 C8orf4Q9NR00 106 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 METRNQ9UJH8 293 aa17.2■□□□□ 0.34
TRIM35-203ENST00000521253 A0A1B0GVI7 797 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 A6NIN4 97 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 OR5B21A6NL26 309 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 DHRS7CA6NNS2 312 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 SRRM5B3KS81 715 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 H3BSH0 61 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 NRASP01111 189 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 MUC1P15941 1255 aaPredicted RBP17.19■□□□□ 0.34
TRIM35-203ENST00000521253 KIR3DL2P43630 455 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 OR12D2P58182 307 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 MICBQ29980 383 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 CLVS2Q5SYC1 327 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 OR10Z1Q8NGY1 313 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 DACT3Q96B18 629 aaPredicted RBP17.19■□□□□ 0.34
TRIM35-203ENST00000521253 GPR173Q9NS66 373 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 ERVK-18Q9QC07 812 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 MYRFQ9Y2G1 1151 aa17.19■□□□□ 0.34
TRIM35-203ENST00000521253 IGHV2-70DA0A0C4DH43 119 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 SYT7O43581 403 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 CLIC3O95833 236 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 GMFBP60983 142 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 ELF3P78545 371 aaPredicted RBP17.18■□□□□ 0.34
TRIM35-203ENST00000521253 KCTD20Q7Z5Y7 419 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 OR2G2Q8NGZ5 317 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 NANPQ8TBE9 248 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 CYGBQ8WWM9 190 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 RAB40AQ8WXH6 277 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 TECTBQ96PL2 329 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 WDR13Q9H1Z4 485 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 SMURF1Q9HCE7 757 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 RPL36Q9Y3U8 105 aaKnown RBP17.18■□□□□ 0.34
TRIM35-203ENST00000521253 AUP1Q9Y679 476 aa17.18■□□□□ 0.34
TRIM35-203ENST00000521253 C22orf46C9J442 243 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 J3QLW9 94 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 AKR7A2O43488 359 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 WBP4O75554 376 aaKnown RBP17.17■□□□□ 0.34
TRIM35-203ENST00000521253 RHBDL1O75783 438 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 FADS2O95864 444 aaKnown RBP17.17■□□□□ 0.34
TRIM35-203ENST00000521253 FSHBP01225 129 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 IGHA1P01876 353 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 ZNF19P17023 458 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 NPY4RP50391 375 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 ACTA2P62736 377 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 ACTG2P63267 376 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 SRSF2Q01130 221 aaKnown RBP17.17■□□□□ 0.34
TRIM35-203ENST00000521253 PAX8Q06710 450 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 RAB40BQ12829 278 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 SMN1Q16637 294 aaKnown RBP17.17■□□□□ 0.34
TRIM35-203ENST00000521253 OGFRL1Q5TC84 451 aaPredicted RBP17.17■□□□□ 0.34
TRIM35-203ENST00000521253 ZNF691Q5VV52 312 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 BTNL3Q6UXE8 466 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 LHFPL3Q86UP9 236 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 RDH10Q8IZV5 341 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 C4orf36Q96KX1 117 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 MRI1Q9BV20 369 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 ADI1Q9BV57 179 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 ALG8Q9BVK2 526 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 RASSF4Q9H2L5 321 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 MRPS18AQ9NVS2 196 aaKnown RBP17.17■□□□□ 0.34
TRIM35-203ENST00000521253 KAAG1Q9UBP8 84 aa17.17■□□□□ 0.34
TRIM35-203ENST00000521253 LOC107986453A0A1B0GWG9 222 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 CASQ2O14958 399 aaPredicted RBP17.16■□□□□ 0.34
TRIM35-203ENST00000521253 TMPRSS2O15393 492 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 FCN3O75636 299 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 UBCP0CG48 685 aaKnown RBP17.16■□□□□ 0.34
TRIM35-203ENST00000521253 EPHA1P21709 976 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 NANOS3P60323 173 aaKnown RBP17.16■□□□□ 0.34
TRIM35-203ENST00000521253 GALEQ14376 348 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 TTC23Q5W5X9 447 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 FDX2Q6P4F2 183 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 HAGHLQ6PII5 290 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms