RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 HAVCR1Q96D42 359 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 THOC1Q96FV9 657 aaKnown RBP4.8□□□□□ -1.64
PABPC1-216ENST00000520868 OR2V2Q96R30 315 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 NUDT16L1Q9BRJ7 211 aaKnown RBP4.8□□□□□ -1.64
PABPC1-216ENST00000520868 CCDC28BQ9BUN5 200 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 ZNF426Q9BUY5 554 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 ALG12Q9BV10 488 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 TXNIPQ9H3M7 391 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 MARCH7Q9H992 704 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 MAN2C1Q9NTJ4 1040 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 PPP1R14DQ9NXH3 145 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 STX18Q9P2W9 335 aaKnown RBP4.8□□□□□ -1.64
PABPC1-216ENST00000520868 IL19Q9UHD0 177 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 IL20RAQ9UHF4 553 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 RIMS3Q9UJD0 308 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 NDUFAF1Q9Y375 327 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 MMP24Q9Y5R2 645 aa4.8□□□□□ -1.64
PABPC1-216ENST00000520868 IGHV2-70DA0A0C4DH43 119 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 A0A1B0GUS0 222 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 A0A1W2PS18 150 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 CLPSL1A2RUU4 121 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 GMNCA6NCL1 334 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 C12orf71A8MTZ7 269 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 SRRM5B3KS81 715 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 H0YL77 283 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 H7C1C5 153 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 M0QZ24 198 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 PPIAL4GP0DN37 164 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 NR2C1P13056 603 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 IFI30P13284 250 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 KITLGP21583 273 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 MSR1P21757 451 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 RBM34P42696 430 aaKnown RBP4.79□□□□□ -1.64
PABPC1-216ENST00000520868 OR1E2P47887 323 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 HTR5AP47898 357 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 SLC18A1P54219 525 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 BRWD1-AS2P59051 145 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 FGF12P61328 243 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 RPL27P61353 136 aaKnown RBP4.79□□□□□ -1.64
PABPC1-216ENST00000520868 LCN6P62502 163 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 VAMP2P63027 116 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 ENDOGQ14249 297 aaKnown RBP4.79□□□□□ -1.64
PABPC1-216ENST00000520868 TTMPQ5BVD1 217 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 INTS11Q5TA45 600 aaKnown RBP4.79□□□□□ -1.64
PABPC1-216ENST00000520868 ASPHD2Q6ICH7 369 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 OR2T2Q6IF00 324 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 KCTD18Q6PI47 426 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-216ENST00000520868 LYPD2Q6UXB3 125 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 SATL1Q86VE3 508 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 NPEPL1Q8NDH3 523 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 OR10AD1Q8NGE0 317 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 OR8B3Q8NGG8 313 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 OR51A7Q8NH64 312 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 LIPHQ8WWY8 451 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 PLEKHA8Q96JA3 519 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 OR8B2Q96RD0 313 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 CGREF1Q99674 301 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 CITED1Q99966 193 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 RBM4BQ9BQ04 359 aaKnown RBP4.79□□□□□ -1.64
PABPC1-216ENST00000520868 TMEM246Q9BRR3 403 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 PCGF1Q9BSM1 259 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 CHIAQ9BZP6 476 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 MMP27Q9H306 513 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 PTTG3PQ9NZH4 202 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 ARMCX1Q9P291 453 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 SLC25A10Q9UBX3 287 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-216ENST00000520868 HSPB7Q9UBY9 170 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 MIOXQ9UGB7 285 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 MED31Q9Y3C7 131 aa4.79□□□□□ -1.64
PABPC1-216ENST00000520868 LSM4Q9Y4Z0 139 aaKnown RBP4.79□□□□□ -1.64
PABPC1-216ENST00000520868 TRAV27A0A087WT01 109 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 TEX13CA0A0J9YWL9 993 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 F5H5P2 479 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 P2RY10O00398 339 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 ANGPT2O15123 496 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 SGCEO43556 437 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 DOK2O60496 412 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 OR5F1O95221 314 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 MELTFP08582 738 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 TSPAN19P0C672 248 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 COX5BP10606 129 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 SELEP16581 610 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 TUBG1P23258 451 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 PMELP40967 661 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 YAP1P46937 504 aaKnown RBP4.78□□□□□ -1.64
PABPC1-216ENST00000520868 PITPNBP48739 271 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 FUT6P51993 359 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 CRYBA2P53672 197 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 SCRN3Q0VDG4 424 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 TAF9Q16594 264 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 GPR157Q5UAW9 335 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 WDR25Q64LD2 544 aaPredicted RBP4.78□□□□□ -1.64
PABPC1-216ENST00000520868 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 C19orf18Q8NEA5 215 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 OR13G1Q8NGZ3 307 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 FNDC8Q8TC99 324 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 LRRC8CQ8TDW0 803 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 RASSF5Q8WWW0 418 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 BPIFA2Q96DR5 249 aa4.78□□□□□ -1.64
PABPC1-216ENST00000520868 MAGEB18Q96M61 343 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms