RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SDK2Q58EX2 2172 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 BRWD1Q9NSI6 2320 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 VSTM2BA6NLU5 285 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 ZNF726A6NNF4 738 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 ZNF727A8MUV8 499 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 RER1O15258 196 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 CA3P07451 260 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 LINC00271P0C7V0 271 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 KIR2DL1P43626 348 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 MMP16P51512 607 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 AFF3P51826 1226 aaKnown RBP11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 SUPT4H1P63272 117 aaKnown RBP11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 NKX6-1P78426 367 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 C4orf17Q53FE4 359 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 BTNL8Q6UX41 500 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 C6orf201Q7Z4U5 140 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 LMX1AQ8TE12 382 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 SGK3Q96BR1 496 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 GFOD1Q9NXC2 390 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 PADI1Q9ULC6 663 aa11.35□□□□□ -0.59
TRAPPC9-208ENST00000520857 FRG2CA6NGY1 282 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 DBX1A6NMT0 343 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 CD5P06127 495 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 TCTN2Q96GX1 697 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 LIN37Q96GY3 246 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 RHOVQ96L33 236 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 RTBDNQ9BSG5 229 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 GAR1Q9NY12 217 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 TINAGQ9UJW2 476 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 MYO7BQ6PIF6 2116 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 FAM221BA6H8Z2 402 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 DXOO77932 396 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 PIGPP57054 158 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 STX12Q86Y82 276 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 ZNF383Q8NA42 475 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 ZFP62Q8NB50 900 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 HDHD3Q9BSH5 251 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 GGACTQ9BVM4 153 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 SLC35B3Q9H1N7 401 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 PRO1933Q9H354 126 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 CUTCQ9NTM9 273 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 FIGNL2A6NMB9 653 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 OR8U8P0C7N1 319 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 PTGER4P35408 488 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 TMEM50BP56557 158 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 SPIN3Q5JUX0 258 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 UEVLDQ8IX04 471 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 RNF133Q8WVZ7 376 aa11.34□□□□□ -0.59
TRAPPC9-208ENST00000520857 NXPH3O95157 252 aa11.33□□□□□ -0.59
TRAPPC9-208ENST00000520857 ISG15P05161 165 aa11.33□□□□□ -0.59
TRAPPC9-208ENST00000520857 GABREP78334 506 aa11.33□□□□□ -0.59
TRAPPC9-208ENST00000520857 SLC35A1P78382 337 aa11.33□□□□□ -0.59
TRAPPC9-208ENST00000520857 VAX1Q5SQQ9 334 aa11.33□□□□□ -0.59
TRAPPC9-208ENST00000520857 SH3BGRL3Q9H299 93 aa11.33□□□□□ -0.59
TRAPPC9-208ENST00000520857 TIMM10BQ9Y5J6 103 aa11.33□□□□□ -0.59
TRAPPC9-208ENST00000520857 A0A0A6YYD4 124 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 TMEM14DPA8MWL7 114 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 CDRT15L2A8MXV6 281 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 PPP1CCP36873 323 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 RABIFP47224 123 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 VAMP2P63027 116 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 FNDC7Q5VTL7 733 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 TMEM217Q8N7C4 229 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 STT3BQ8TCJ2 826 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 SDHAF3Q9NRP4 125 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 POMT1Q9Y6A1 747 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 CDH23Q9H251 3354 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 ALG1L2C9J202 215 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 PPP1R2P9O14990 202 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 OR5H8P0DN80 308 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF84P51523 738 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 PRSS12P56730 875 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 TAF9Q16594 264 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 BRICD5Q6PL45 260 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 OR8B12Q8NGG6 310 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 OR2G3Q8NGZ4 309 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF160Q9HCG1 818 aa11.33□□□□□ -0.6
TRAPPC9-208ENST00000520857 A0A1W2PNR3 127 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 A0A1W2PQF6 199 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 E5RGE8 158 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 FAHP16930 419 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 SNCAP37840 140 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 RRADP55042 308 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 YPEL5P62699 121 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 FOXK1P85037 733 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 PPA1Q15181 289 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 RSU1Q15404 277 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 DEGS2Q6QHC5 323 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 BATF2Q8N1L9 274 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 ARHGEF39Q8N4T4 335 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 KLHDC7BQ96G42 594 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 BSCL2Q96G97 398 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 OR5B2Q96R09 309 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 PLEKHA2Q9HB19 425 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 FAM206AQ9NX38 181 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 NSG2Q9Y328 171 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 FAM230AA0A1W2PPH8 454 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 LOC390937A0A1W2PQ73 354 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms