RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 SP6Q3SY56 376 aa2.59□□□□□ -1.99
NPM1-206ENST00000519955 ZFAND6Q6FIF0 208 aa2.59□□□□□ -1.99
NPM1-206ENST00000519955 LINC00336Q6ZUF6 198 aa2.59□□□□□ -1.99
NPM1-206ENST00000519955 RNF10Q8N5U6 811 aaKnown RBP2.59□□□□□ -1.99
NPM1-206ENST00000519955 PIH1D2Q8WWB5 315 aa2.59□□□□□ -1.99
NPM1-206ENST00000519955 NAPGQ99747 312 aaPredicted RBP2.59□□□□□ -1.99
NPM1-206ENST00000519955 PDCD1LG2Q9BQ51 273 aa2.59□□□□□ -1.99
NPM1-206ENST00000519955 SHANK2-AS3Q9BTD1 123 aa2.59□□□□□ -1.99
NPM1-206ENST00000519955 PRSS16Q9NQE7 514 aa2.59□□□□□ -1.99
NPM1-206ENST00000519955 HMGXB4Q9UGU5 601 aa2.59□□□□□ -1.99
NPM1-206ENST00000519955 RWDD2AQ9UIY3 292 aa2.59□□□□□ -1.99
NPM1-206ENST00000519955 IGHV6-1A0A0B4J1U7 121 aa2.58□□□□□ -2
NPM1-206ENST00000519955 GOLGA6L4A6NEF3 574 aa2.58□□□□□ -2
NPM1-206ENST00000519955 PFN1P07737 140 aaKnown RBP2.58□□□□□ -2
NPM1-206ENST00000519955 SLC35G6P0C7Q6 338 aa2.58□□□□□ -2
NPM1-206ENST00000519955 PRKCDQ05655 676 aa2.58□□□□□ -2
NPM1-206ENST00000519955 TRDNQ13061 729 aa2.58□□□□□ -2
NPM1-206ENST00000519955 BAMBIQ13145 260 aa2.58□□□□□ -2
NPM1-206ENST00000519955 MAPRE2Q15555 327 aa2.58□□□□□ -2
NPM1-206ENST00000519955 TSC22D1Q15714 1073 aa2.58□□□□□ -2
NPM1-206ENST00000519955 TAF9Q16594 264 aa2.58□□□□□ -2
NPM1-206ENST00000519955 HHATQ5VTY9 493 aa2.58□□□□□ -2
NPM1-206ENST00000519955 MORN3Q6PF18 240 aaPredicted RBP2.58□□□□□ -2
NPM1-206ENST00000519955 MRPL21Q7Z2W9 205 aaKnown RBP2.58□□□□□ -2
NPM1-206ENST00000519955 BBS7Q8IWZ6 715 aa2.58□□□□□ -2
NPM1-206ENST00000519955 PEX13Q92968 403 aa2.58□□□□□ -2
NPM1-206ENST00000519955 ISG20Q96AZ6 181 aaKnown RBP2.58□□□□□ -2
NPM1-206ENST00000519955 TVP23CQ96ET8 276 aa2.58□□□□□ -2
NPM1-206ENST00000519955 CERS2Q96G23 380 aa2.58□□□□□ -2
NPM1-206ENST00000519955 TBL1XR1Q9BZK7 514 aa2.58□□□□□ -2
NPM1-206ENST00000519955 BLZF1Q9H2G9 400 aa2.58□□□□□ -2
NPM1-206ENST00000519955 OR51B5Q9H339 312 aa2.58□□□□□ -2
NPM1-206ENST00000519955 CHRAC1Q9NRG0 131 aa2.58□□□□□ -2
NPM1-206ENST00000519955 PEF1Q9UBV8 284 aaKnown RBP2.58□□□□□ -2
NPM1-206ENST00000519955 TICRRQ7Z2Z1 1910 aa2.58□□□□□ -2
NPM1-206ENST00000519955 ZNF608Q9ULD9 1512 aaPredicted RBP2.58□□□□□ -2
NPM1-206ENST00000519955 CBR3O75828 277 aa2.57□□□□□ -2
NPM1-206ENST00000519955 PMCHP20382 165 aa2.57□□□□□ -2
NPM1-206ENST00000519955 GABRR2P28476 465 aa2.57□□□□□ -2
NPM1-206ENST00000519955 DAOAP59103 153 aa2.57□□□□□ -2
NPM1-206ENST00000519955 SLC35A1P78382 337 aa2.57□□□□□ -2
NPM1-206ENST00000519955 ZNF235Q14590 738 aa2.57□□□□□ -2
NPM1-206ENST00000519955 KLHL40Q2TBA0 621 aa2.57□□□□□ -2
NPM1-206ENST00000519955 MLIPQ5VWP3 458 aa2.57□□□□□ -2
NPM1-206ENST00000519955 FAM104BQ5XKR9 115 aa2.57□□□□□ -2
NPM1-206ENST00000519955 DAZ4Q86SG3 579 aaKnown RBP2.57□□□□□ -2
NPM1-206ENST00000519955 NT5DC3Q86UY8 548 aa2.57□□□□□ -2
NPM1-206ENST00000519955 SLC7A5P1Q8MH63 180 aa2.57□□□□□ -2
NPM1-206ENST00000519955 IL22Q9GZX6 179 aa2.57□□□□□ -2
NPM1-206ENST00000519955 ARV1Q9H2C2 271 aa2.57□□□□□ -2
NPM1-206ENST00000519955 NCOR1P1Q9H4R4 102 aa2.57□□□□□ -2
NPM1-206ENST00000519955 DAZ1Q9NQZ3 744 aaKnown RBP2.57□□□□□ -2
NPM1-206ENST00000519955 RAB22AQ9UL26 194 aa2.57□□□□□ -2
NPM1-206ENST00000519955 PSME2Q9UL46 239 aa2.57□□□□□ -2
NPM1-206ENST00000519955 TTC41PQ6P2S7 1318 aa2.57□□□□□ -2
NPM1-206ENST00000519955 NID2Q14112 1375 aa2.57□□□□□ -2
NPM1-206ENST00000519955 LOC102724200A0A096LPH7 203 aaPredicted RBP2.56□□□□□ -2
NPM1-206ENST00000519955 ARPC4-TTLL3A0A0A6YYG9 625 aa2.56□□□□□ -2
NPM1-206ENST00000519955 IGKV1-6A0A0C4DH72 117 aa2.56□□□□□ -2
NPM1-206ENST00000519955 TMEM72A0PK05 275 aa2.56□□□□□ -2
NPM1-206ENST00000519955 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.56□□□□□ -2
NPM1-206ENST00000519955 CLDN34H7C241 214 aa2.56□□□□□ -2
NPM1-206ENST00000519955 TRDMT1O14717 391 aaKnown RBP2.56□□□□□ -2
NPM1-206ENST00000519955 IGHV1-46P01743 117 aa2.56□□□□□ -2
NPM1-206ENST00000519955 KLK1P06870 262 aa2.56□□□□□ -2
NPM1-206ENST00000519955 HLA-DMAP28067 261 aa2.56□□□□□ -2
NPM1-206ENST00000519955 TGM4P49221 684 aa2.56□□□□□ -2
NPM1-206ENST00000519955 PSMD4P55036 377 aaKnown RBP2.56□□□□□ -2
NPM1-206ENST00000519955 MTPNP58546 118 aa2.56□□□□□ -2
NPM1-206ENST00000519955 LCN2P80188 198 aa2.56□□□□□ -2
NPM1-206ENST00000519955 C2orf54Q08AI8 447 aa2.56□□□□□ -2
NPM1-206ENST00000519955 SPIN3Q5JUX0 258 aa2.56□□□□□ -2
NPM1-206ENST00000519955 TMEM69Q5SWH9 247 aa2.56□□□□□ -2
NPM1-206ENST00000519955 ZNF678Q5SXM1 525 aa2.56□□□□□ -2
NPM1-206ENST00000519955 TTC19Q6DKK2 380 aaPredicted RBP2.56□□□□□ -2
NPM1-206ENST00000519955 ZNF664Q8N3J9 261 aa2.56□□□□□ -2
NPM1-206ENST00000519955 TMEM234Q8WY98 164 aa2.56□□□□□ -2
NPM1-206ENST00000519955 Q96MT0 163 aa2.56□□□□□ -2
NPM1-206ENST00000519955 STMN4Q9H169 189 aaPredicted RBP2.56□□□□□ -2
NPM1-206ENST00000519955 ARMC7Q9H6L4 198 aa2.56□□□□□ -2
NPM1-206ENST00000519955 VAX2Q9UIW0 290 aa2.56□□□□□ -2
NPM1-206ENST00000519955 ZNF391Q9UJN7 358 aa2.56□□□□□ -2
NPM1-206ENST00000519955 RHBDD3Q9Y3P4 386 aa2.56□□□□□ -2
NPM1-206ENST00000519955 PLEKHG2Q9H7P9 1386 aa2.56□□□□□ -2
NPM1-206ENST00000519955 NPHP4O75161 1426 aaPredicted RBP2.56□□□□□ -2
NPM1-206ENST00000519955 A0A0G2JMP0 313 aa2.55□□□□□ -2
NPM1-206ENST00000519955 A0A0X1KG70 313 aa2.55□□□□□ -2
NPM1-206ENST00000519955 CENPXA8MT69 81 aa2.55□□□□□ -2
NPM1-206ENST00000519955 ZNF701M0R085 212 aaPredicted RBP2.55□□□□□ -2
NPM1-206ENST00000519955 GCGP01275 180 aa2.55□□□□□ -2
NPM1-206ENST00000519955 IGKV1-39P01597 117 aa2.55□□□□□ -2
NPM1-206ENST00000519955 IGKV1D-39P04432 117 aa2.55□□□□□ -2
NPM1-206ENST00000519955 P0C880 135 aa2.55□□□□□ -2
NPM1-206ENST00000519955 PAFAH1B2P68402 229 aa2.55□□□□□ -2
NPM1-206ENST00000519955 MEF2BQ02080 365 aaPredicted RBP2.55□□□□□ -2
NPM1-206ENST00000519955 ADIGQ0VDE8 80 aa2.55□□□□□ -2
NPM1-206ENST00000519955 BIKQ13323 160 aa2.55□□□□□ -2
NPM1-206ENST00000519955 HIKESHIQ53FT3 197 aa2.55□□□□□ -2
NPM1-206ENST00000519955 OR2W3Q7Z3T1 314 aa2.55□□□□□ -2
NPM1-206ENST00000519955 SHROOM3Q8TF72 1996 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms