RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ZNF492Q9P255 531 aa2.69□□□□□ -1.98
PTPN12-213ENST00000519553 RABL2AQ9UBK7 228 aaPredicted RBP2.69□□□□□ -1.98
PTPN12-213ENST00000519553 ZNF230Q9UIE0 474 aaPredicted RBP2.69□□□□□ -1.98
PTPN12-213ENST00000519553 KIAA1671Q9BY89 1806 aa2.69□□□□□ -1.98
PTPN12-213ENST00000519553 PHLPP2Q6ZVD8 1323 aa2.68□□□□□ -1.98
PTPN12-213ENST00000519553 LOC102724200A0A096LPH7 203 aaPredicted RBP2.68□□□□□ -1.98
PTPN12-213ENST00000519553 SLC22A20A6NK97 555 aa2.68□□□□□ -1.98
PTPN12-213ENST00000519553 IGLV6-57P01721 117 aa2.68□□□□□ -1.98
PTPN12-213ENST00000519553 ZNF35P13682 527 aa2.68□□□□□ -1.98
PTPN12-213ENST00000519553 FAM104BQ5XKR9 115 aa2.68□□□□□ -1.98
PTPN12-213ENST00000519553 LINC00336Q6ZUF6 198 aa2.68□□□□□ -1.98
PTPN12-213ENST00000519553 SFXN5Q8TD22 340 aa2.68□□□□□ -1.98
PTPN12-213ENST00000519553 PDCD1LG2Q9BQ51 273 aa2.68□□□□□ -1.98
PTPN12-213ENST00000519553 SND1-IT1Q9HBX3 110 aa2.68□□□□□ -1.98
PTPN12-213ENST00000519553 ZNF99A8MXY4 864 aaPredicted RBP2.67□□□□□ -1.98
PTPN12-213ENST00000519553 SUPT3HB4E1H0 165 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 KLHL2O95198 593 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 IGHV1-46P01743 117 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 MPIP34949 423 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 PRSS3P35030 304 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 NDUFAF7Q7L592 441 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 CMTM8Q8IZV2 173 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 DAW1Q8N136 415 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 TRAM1L1Q8N609 369 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 LINC00469Q8N7U9 141 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 GLYATL2Q8WU03 294 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 TMEM175Q9BSA9 504 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 NCOR1P1Q9H4R4 102 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 ZC4H2Q9NQZ6 224 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 TMEM100Q9NV29 134 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 VAX2Q9UIW0 290 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 CES1P1Q9UKY3 287 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 NDRG2Q9UN36 371 aaKnown RBP2.67□□□□□ -1.98
PTPN12-213ENST00000519553 R4GN34 69 aa2.67□□□□□ -1.98
PTPN12-213ENST00000519553 C4orf51C9J302 202 aa2.66□□□□□ -1.98
PTPN12-213ENST00000519553 MAGEA1P43355 309 aa2.66□□□□□ -1.98
PTPN12-213ENST00000519553 ERFP50548 548 aa2.66□□□□□ -1.98
PTPN12-213ENST00000519553 TAS2R39P59534 338 aa2.66□□□□□ -1.98
PTPN12-213ENST00000519553 ZFAND6Q6FIF0 208 aa2.66□□□□□ -1.98
PTPN12-213ENST00000519553 SNF8Q96H20 258 aa2.66□□□□□ -1.98
PTPN12-213ENST00000519553 OR51B5Q9H339 312 aa2.66□□□□□ -1.98
PTPN12-213ENST00000519553 FANCEQ9HB96 536 aa2.66□□□□□ -1.98
PTPN12-213ENST00000519553 HMGXB4Q9UGU5 601 aa2.66□□□□□ -1.98
PTPN12-213ENST00000519553 ZNF608Q9ULD9 1512 aaPredicted RBP2.66□□□□□ -1.98
PTPN12-213ENST00000519553 ZNF407Q9C0G0 2248 aa2.65□□□□□ -1.98
PTPN12-213ENST00000519553 TMEM72A0PK05 275 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 FARS2O95363 451 aaKnown RBP2.65□□□□□ -1.99
PTPN12-213ENST00000519553 CLDN6P56747 220 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 RPL18AQ02543 176 aaKnown RBP2.65□□□□□ -1.99
PTPN12-213ENST00000519553 HHATQ5VTY9 493 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 HCP5Q6MZN7 132 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 WDR31Q8NA23 367 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 OR2M7Q8NG81 312 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 GPX8Q8TED1 209 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 NAT6Q93015 286 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 ISOC2Q96AB3 205 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 CSPG4P5Q96PW8 444 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 NAPGQ99747 312 aaPredicted RBP2.65□□□□□ -1.99
PTPN12-213ENST00000519553 ARV1Q9H2C2 271 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 C8orf33Q9H7E9 229 aaPredicted RBP2.65□□□□□ -1.99
PTPN12-213ENST00000519553 TRIM45Q9H8W5 580 aaPredicted RBP2.65□□□□□ -1.99
PTPN12-213ENST00000519553 TAS2R1Q9NYW7 299 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 RAB22AQ9UL26 194 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 PPIL1Q9Y3C6 166 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 ZSWIM8A7E2V4 1837 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 TRIOBPQ9H2D6 2365 aa2.65□□□□□ -1.99
PTPN12-213ENST00000519553 CACNA1DQ01668 2161 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 C2orf16Q68DN1 1984 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 ARPC4-TTLL3A0A0A6YYG9 625 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 GOLGA6L4A6NEF3 574 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 H3BN98 237 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 UPK1BO75841 260 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 IHHQ14623 411 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 TSC22D1Q15714 1073 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 KLHL40Q2TBA0 621 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 DEFB134Q4QY38 66 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 WDR59Q6PJI9 974 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 ZCCHC24Q8N2G6 241 aaKnown RBP2.64□□□□□ -1.99
PTPN12-213ENST00000519553 RNF10Q8N5U6 811 aaKnown RBP2.64□□□□□ -1.99
PTPN12-213ENST00000519553 OR1S1Q8NH92 325 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 ZNF649Q9BS31 505 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 ZNF302Q9NR11 478 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 DDX19BQ9UMR2 479 aa2.64□□□□□ -1.99
PTPN12-213ENST00000519553 JCADQ9P266 1359 aa2.63□□□□□ -1.99
PTPN12-213ENST00000519553 BRCA1P38398 1863 aaKnown RBP2.63□□□□□ -1.99
PTPN12-213ENST00000519553 IZUMO1RA6ND01 250 aa2.63□□□□□ -1.99
PTPN12-213ENST00000519553 HACD1B0YJ81 288 aa2.63□□□□□ -1.99
PTPN12-213ENST00000519553 MYL12BO14950 172 aa2.63□□□□□ -1.99
PTPN12-213ENST00000519553 TTC4O95801 387 aa2.63□□□□□ -1.99
PTPN12-213ENST00000519553 GRB2P62993 217 aaKnown RBP2.63□□□□□ -1.99
PTPN12-213ENST00000519553 TPRG1LQ5T0D9 272 aa2.63□□□□□ -1.99
PTPN12-213ENST00000519553 APOBEC3HQ6NTF7 200 aaKnown RBP2.63□□□□□ -1.99
PTPN12-213ENST00000519553 PDPNQ86YL7 162 aa2.63□□□□□ -1.99
PTPN12-213ENST00000519553 OTUD6BQ8N6M0 293 aa2.63□□□□□ -1.99
PTPN12-213ENST00000519553 ZNF420Q8TAQ5 688 aaPredicted RBP2.63□□□□□ -1.99
PTPN12-213ENST00000519553 LOXHD1Q8IVV2 1947 aa2.63□□□□□ -1.99
PTPN12-213ENST00000519553 DHX57Q6P158 1386 aaKnown RBP2.62□□□□□ -1.99
PTPN12-213ENST00000519553 GOLGA8JA6NMD2 632 aa2.62□□□□□ -1.99
PTPN12-213ENST00000519553 AKR7A2O43488 359 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms