RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LRRC69Q6ZNQ3 347 aa16.12■□□□□ 0.17
SDC2-202ENST00000518385 HOGA1Q86XE5 327 aa16.12■□□□□ 0.17
SDC2-202ENST00000518385 LDLRAD3Q86YD5 345 aa16.12■□□□□ 0.17
SDC2-202ENST00000518385 JAGN1Q8N5M9 183 aa16.12■□□□□ 0.17
SDC2-202ENST00000518385 PSMF1Q92530 271 aa16.12■□□□□ 0.17
SDC2-202ENST00000518385 GNRHR2Q96P88 292 aa16.12■□□□□ 0.17
SDC2-202ENST00000518385 MED29Q9NX70 200 aa16.12■□□□□ 0.17
SDC2-202ENST00000518385 SLC5A6Q9Y289 635 aa16.12■□□□□ 0.17
SDC2-202ENST00000518385 RHBDD3Q9Y3P4 386 aa16.12■□□□□ 0.17
SDC2-202ENST00000518385 LOC107986453A0A1B0GWG9 222 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 A0A1W2PNR3 127 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 F8W036 122 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 PGA4P0DJD7 388 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 PGA3P0DJD8 388 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 LAP3P28838 519 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 CYB561P49447 251 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 CLRN1P58418 232 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 BLOC1S1P78537 153 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 AVPI1Q5T686 147 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 PRSS54Q6PEW0 395 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 RHOUQ7L0Q8 258 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 NOXO1Q8NFA2 376 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 OR10H5Q8NGA6 315 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 THOC3Q96J01 351 aaKnown RBP16.11■□□□□ 0.17
SDC2-202ENST00000518385 FER1L6-AS2Q96M78 137 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 AQP10Q96PS8 301 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 G6PC2Q9NQR9 355 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 ABI3Q9P2A4 366 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 MEMO1Q9Y316 297 aa16.11■□□□□ 0.17
SDC2-202ENST00000518385 ZNF726A6NNF4 738 aa16.1■□□□□ 0.17
SDC2-202ENST00000518385 ABOP16442 354 aa16.1■□□□□ 0.17
SDC2-202ENST00000518385 SFTPDP35247 375 aa16.1■□□□□ 0.17
SDC2-202ENST00000518385 MFGE8Q08431 387 aaPredicted RBP16.1■□□□□ 0.17
SDC2-202ENST00000518385 RAET1LQ5VY80 246 aa16.1■□□□□ 0.17
SDC2-202ENST00000518385 SLC39A7Q92504 469 aa16.1■□□□□ 0.17
SDC2-202ENST00000518385 GTF2A1LQ9UNN4 478 aa16.1■□□□□ 0.17
SDC2-202ENST00000518385 CFAP54Q96N23 3096 aa16.1■□□□□ 0.17
SDC2-202ENST00000518385 TMEM235A6NFC5 223 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 LINC01387J3KSC0 135 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 ECI1P42126 302 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 FOXK1P85037 733 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 ARL6IP1Q15041 203 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 KCNMB1Q16558 191 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 HIST3H3Q16695 136 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 ODF4Q2M2E3 257 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 ZNF468Q5VIY5 522 aaPredicted RBP16.09■□□□□ 0.17
SDC2-202ENST00000518385 MDGA2Q7Z553 956 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 VASH2Q86V25 355 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 DCUN1D4Q92564 292 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 RPS27P42677 84 aaKnown RBP16.09■□□□□ 0.17
SDC2-202ENST00000518385 QRFPP83859 136 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 FMODQ06828 376 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 SURF2Q15527 256 aaPredicted RBP16.09■□□□□ 0.17
SDC2-202ENST00000518385 ZNF529Q6P280 563 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 SLC25A47Q6Q0C1 308 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 COMMD1Q8N668 190 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 OR10R2Q8NGX6 335 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 TERB2Q8NHR7 220 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 ST7LQ8TDW4 575 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 RNF133Q8WVZ7 376 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 INTS12Q96CB8 462 aaKnown RBP16.09■□□□□ 0.17
SDC2-202ENST00000518385 SMIM8Q96KF7 97 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 JSRP1Q96MG2 331 aaPredicted RBP16.09■□□□□ 0.17
SDC2-202ENST00000518385 SF3B5Q9BWJ5 86 aaKnown RBP16.09■□□□□ 0.17
SDC2-202ENST00000518385 RNF122Q9H9V4 155 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 COA4Q9NYJ1 87 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 LPAR3Q9UBY5 353 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 CGGBP1Q9UFW8 167 aaPredicted RBP16.09■□□□□ 0.17
SDC2-202ENST00000518385 CSAG2Q9Y5P2 127 aa16.09■□□□□ 0.17
SDC2-202ENST00000518385 C5orf51A6NDU8 294 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 SFT2D2O95562 160 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 S100A8P05109 93 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 FPR2P25090 351 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 CLN3Q13286 438 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 RTL6Q6ICC9 239 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 CORO6Q6QEF8 472 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 DCXRQ7Z4W1 244 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 OR5D14Q8NGL3 314 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 SNIP1Q8TAD8 396 aaKnown RBP16.08■□□□□ 0.16
SDC2-202ENST00000518385 GLYATL2Q8WU03 294 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 C11orf40Q8WZ69 217 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 SEC22AQ96IW7 307 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 EMC6Q9BV81 110 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 UQCC1Q9NVA1 299 aa16.08■□□□□ 0.16
SDC2-202ENST00000518385 DOCK10Q96BY6 2186 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 FIGNL2A6NMB9 653 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 TMEM14DPA8MWL7 114 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 PRSS44E7EML9 344 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 GPR31O00270 319 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 PGAM2P15259 253 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 SERPINF1P36955 418 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 CAV2P51636 162 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 ZNF133P52736 654 aaPredicted RBP16.07■□□□□ 0.16
SDC2-202ENST00000518385 RAC3P60763 192 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 FOXC1Q12948 553 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 LRRC37A5PQ49AS3 106 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 ABHD17BQ5VST6 288 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 KLHL24Q6TFL4 600 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 NAA40Q86UY6 237 aa16.07■□□□□ 0.16
SDC2-202ENST00000518385 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms