RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ZNF680Q8NEM1 530 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 ZFAND1Q8TCF1 268 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 PIH1D2Q8WWB5 315 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 S100PBPQ96BU1 408 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 DYNLL2Q96FJ2 89 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 ZBED3Q96IU2 234 aaPredicted RBP1.53□□□□□ -2.16
SKP1-203ENST00000517625 C18orf15Q96N68 181 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 ALS2CR12Q96Q35 445 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 PDCD1LG2Q9BQ51 273 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 TMEM175Q9BSA9 504 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 STMN4Q9H169 189 aaPredicted RBP1.53□□□□□ -2.16
SKP1-203ENST00000517625 ARMC7Q9H6L4 198 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 TDRD3Q9H7E2 651 aaKnown RBP1.53□□□□□ -2.16
SKP1-203ENST00000517625 DYRK4Q9NR20 520 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 RBFOX1Q9NWB1 397 aaKnown RBP1.53□□□□□ -2.16
SKP1-203ENST00000517625 TAS2R5Q9NYW4 299 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 NUP214P35658 2090 aaPredicted RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 TTC41PQ6P2S7 1318 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 IGKV2-24A0A0C4DH68 120 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 TMEM72A0PK05 275 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 ZNF233A6NK53 670 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 CEACAM18A8MTB9 384 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 K7EM74 188 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 AKR7A2O43488 359 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 SLC19A2O60779 497 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 CCDC22O60826 627 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 SCELO95171 688 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 SNAI1O95863 264 aaPredicted RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 GCGP01275 180 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 IGHV1-46P01743 117 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 IGKV4-1P06312 121 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 SNRPAP09012 282 aaKnown RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 PMCHP20382 165 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 PEX19P40855 299 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 CSKP41240 450 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 PSMD4P55036 377 aaKnown RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 ATP6V0D1P61421 351 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 PSMC5P62195 406 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 SLC35A1P78382 337 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 IL15RAQ13261 267 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 HSP90AA4PQ58FG1 418 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 HHATQ5VTY9 493 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 MLIPQ5VWP3 458 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 THOC7Q6I9Y2 204 aaKnown RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 APOBEC3HQ6NTF7 200 aaKnown RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 VTCN1Q7Z7D3 282 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 SLC7A5P1Q8MH63 180 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 STK40Q8N2I9 435 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 OR5T3Q8NGG3 340 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 OR6K6Q8NGW6 343 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 OR1P1Q8NH06 330 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 RXFP2Q8WXD0 754 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 TMEM234Q8WY98 164 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 UBE2E2Q96LR5 201 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 NAPGQ99747 312 aaPredicted RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 MARVELD1Q9BSK0 173 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 TBL1XR1Q9BZK7 514 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 ARV1Q9H2C2 271 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 PRSS16Q9NQE7 514 aa1.52□□□□□ -2.17
SKP1-203ENST00000517625 DHCR7Q9UBM7 475 aaKnown RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 NDRG2Q9UN36 371 aaKnown RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 FARSAQ9Y285 508 aaKnown RBP1.52□□□□□ -2.17
SKP1-203ENST00000517625 SCN1AP35498 2009 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 UBR4Q5T4S7 5183 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 IGKV3D-11A0A0A0MRZ8 115 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 TRAV8-4A0A0B4J246 113 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 IGHV2OR16-5A0A0B4J2B6 119 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 VGLL3A8MV65 326 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 DFFAO00273 331 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 GATCO43716 136 aaKnown RBP1.51□□□□□ -2.17
SKP1-203ENST00000517625 P01737 135 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 IL3RAP26951 378 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 TGM4P49221 684 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 PSMB2P49721 201 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 CMC4P56277 68 aaPredicted RBP1.51□□□□□ -2.17
SKP1-203ENST00000517625 TAS2R60P59551 318 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 RBX1P62877 108 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 ELF3P78545 371 aaPredicted RBP1.51□□□□□ -2.17
SKP1-203ENST00000517625 LCN2P80188 198 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 ADIGQ0VDE8 80 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 ST3GAL4Q11206 333 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 BIKQ13323 160 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 DOC2AQ14183 400 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 FBXL19-AS1Q494R0 122 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 CDNFQ49AH0 187 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 HIKESHIQ53FT3 197 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 CPTPQ5TA50 214 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 KDM4DQ6B0I6 523 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 BBS7Q8IWZ6 715 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 TMEM159Q96B96 161 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 TM2D3Q9BRN9 247 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 ZNF649Q9BS31 505 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 LHX5Q9H2C1 402 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 WDR55Q9H6Y2 383 aaPredicted RBP1.51□□□□□ -2.17
SKP1-203ENST00000517625 LINC00574Q9H8X3 128 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 C6orf50Q9HD87 102 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 DDX18Q9NVP1 670 aaKnown RBP1.51□□□□□ -2.17
SKP1-203ENST00000517625 TAS2R1Q9NYW7 299 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 RABL2AQ9UBK7 228 aaPredicted RBP1.51□□□□□ -2.17
SKP1-203ENST00000517625 VAX2Q9UIW0 290 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms