RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CD1AP06126 327 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 NGFRP08138 427 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 ACAA2P42765 397 aaKnown RBP9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 FABP6P51161 128 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 PSG6Q00889 435 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 PPP1R1AQ13522 171 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 C1QL3Q5VWW1 255 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 SLC22A25Q6T423 547 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 LGI3Q8N145 548 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 MARCH1Q8TCQ1 289 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 FGF11Q92914 225 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 IFT22Q9H7X7 185 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 LRP12Q9Y561 859 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR4C45A6NMZ5 311 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 HSPB2A8KAH6 182 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 ZNF732B4DXR9 585 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 HSPB2Q16082 182 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR52H1Q8NGJ2 320 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR11L1Q8NGX0 322 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 TCTEX1D2Q8WW35 142 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 C14orf79Q96F83 325 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 TSPAN32Q96QS1 320 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 PFDN5Q99471 154 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 HDGFL3Q9Y3E1 203 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 SCN5AQ14524 2016 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR2A4O95047 310 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 ARL3P36405 182 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 KCNRGQ8N5I3 272 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 PLPP5Q8NEB5 264 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR2A7Q96R45 310 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 TRIB1Q96RU8 372 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 NGBQ9NPG2 151 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 SLC17A5Q9NRA2 495 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR2M5A3KFT3 312 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 RER1O15258 196 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 FGF2P09038 288 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 DUSP1P28562 367 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 UNQ9370/PRO34162Q6UXP9 181 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 CBLN2Q8IUK8 224 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 ANKRD9Q96BM1 317 aaPredicted RBP9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 MRPS24Q96EL2 167 aaKnown RBP9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 SHARPINQ9H0F6 387 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 SMCO4Q9NRQ5 59 aa9.67□□□□□ -0.86
PCDHGA1-202ENST00000517417 C4orf47A7E2U8 309 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 NXPH1P58417 271 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 RPP30P78346 268 aaKnown RBP9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 DEFB109BQ30KR1 87 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR2B11Q5JQS5 317 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 CDC20BQ86Y33 519 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 SLC38A9Q8NBW4 561 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 HEYLQ9NQ87 328 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 RASL12Q9NYN1 266 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 FLVCR1Q9Y5Y0 555 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 ANKUB1A6NFN9 424 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 RNF212BA8MTL3 300 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 KITLGP21583 273 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 CSF2RBP32927 897 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 HAAOP46952 286 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 TOMM34Q15785 309 aaPredicted RBP9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 ZNF141Q15928 474 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 SPATA46Q5T0L3 261 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR8G2PQ6IF36 304 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR10J5Q8NHC4 309 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 REEP6Q96HR9 211 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 MOB1AQ9H8S9 216 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 TMEM9BQ9NQ34 198 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 P4HTMQ9NXG6 502 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 RPS10P46783 165 aaKnown RBP9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 PDCD1Q15116 288 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 DPPA2Q7Z7J5 298 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 CMBLQ96DG6 245 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 PHYHIPLQ96FC7 376 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 MED9Q9NWA0 146 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 MTCH2Q9Y6C9 303 aa9.66□□□□□ -0.86
PCDHGA1-202ENST00000517417 TMEM218A2RU14 115 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 MPZL1O95297 269 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 BCKDHBP21953 392 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 RPS4Y1P22090 263 aaKnown RBP9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 CD80P33681 288 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 RPS11P62280 158 aaKnown RBP eCLIP9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 TESK1Q15569 626 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR8G1Q15617 311 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 CD226Q15762 336 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 ZNF808Q8N4W9 903 aaPredicted RBP9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 TAF9BQ9HBM6 251 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 EXOSC3Q9NQT5 275 aaKnown RBP9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 B3GAT1Q9P2W7 334 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 C5orf42Q9H799 3197 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 KIR2DS1A0A191URI9 304 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 NUDT19A8MXV4 375 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 H3BMH7 237 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 SIRPB1O00241 398 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 HPP00738 406 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR5H8P0DN80 308 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 KIR2DS4P43632 304 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 RAB13P51153 203 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 PRSS12P56730 875 aa9.65□□□□□ -0.86
PCDHGA1-202ENST00000517417 FOXL2P58012 376 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms