RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 OR10AD1Q8NGE0 317 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR4C13Q8NGP0 309 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR6N1Q8NGY5 312 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 NEIL3Q8TAT5 605 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 GEMIN6Q8WXD5 167 aaKnown RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 SLC35B4Q969S0 331 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF524Q96C55 264 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 SMIM12Q96EX1 92 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 GMPPAQ96IJ6 420 aaPredicted RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 BTN2A3PQ96KV6 586 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF597Q96LX8 424 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 RDH12Q96NR8 316 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 YTHDF1Q9BYJ9 559 aaKnown RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 OCR1Q9BZK8 76 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 DDX31Q9H8H2 851 aaKnown RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 DNAJC27Q9NZQ0 273 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 PAK5Q9P286 719 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 VAX2Q9UIW0 290 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF391Q9UJN7 358 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 KLHL21Q9UJP4 597 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 NDRG2Q9UN36 371 aaKnown RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 TP53TG5Q9Y2B4 290 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF257Q9Y2Q1 563 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 KCNE3Q9Y6H6 103 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 PCDH11XQ9BZA7 1347 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 MTUS2Q5JR59 1369 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 TRIP12Q14669 1992 aaPredicted RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 TRAV9-2A0A087WT02 112 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 TRAV39A0A0B4J263 110 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 MPTX1A8MV57 137 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 DISC1C4P0D8 188 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 PHYHO14832 338 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 C6orf47O95873 294 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 GKN3PP0CG01 181 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 CD99P14209 185 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 AKR1C4P17516 323 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 RCC1P18754 421 aaPredicted RBP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 ALOX5APP20292 161 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 M6PRP20645 277 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 HOXA5P20719 270 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 WARSP23381 471 aaKnown RBP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 PAX6P26367 422 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 CD38P28907 300 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 TSPOP30536 169 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 ADORA1P30542 326 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 CHRNB4P30926 498 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 IL2RGP31785 369 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 CCR7P32248 378 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 RCVRNP35243 200 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 NDUFA8P51970 172 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 CDKN2DP55273 166 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF763Q0D2J5 394 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR2F1Q13607 317 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 SHHQ15465 462 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 LRRC36Q1X8D7 754 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 TTC32Q5I0X7 151 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 C1orf195Q5TG92 126 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 C19orf48Q6RUI8 117 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 FAM183BPQ6ZVS7 135 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 C1QL2Q7Z5L3 287 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 MYPOPQ86VE0 399 aaPredicted RBP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 C17orf82Q86X59 251 aaPredicted RBP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 NIT1Q86X76 327 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 GATD1Q8NB37 220 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 GPR26Q8NDV2 337 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR52E4Q8NGH9 312 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR10J6PQ8NGY7 276 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 SLC37A2Q8TED4 501 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 ASB13Q8WXK3 278 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 RPL36ALQ969Q0 106 aaKnown RBP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 PPCDCQ96CD2 204 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 IMP4Q96G21 291 aaKnown RBP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR2M4Q96R27 311 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 METTL26Q96S19 204 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 PITX2Q99697 317 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 FAAP24Q9BTP7 215 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 TMED9Q9BVK6 235 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 MRIQ9BWK5 157 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 GABARAPL3Q9BY60 117 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 C6orf62Q9GZU0 229 aaPredicted RBP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 PCBD2Q9H0N5 130 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR51I1Q9H343 314 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 FBXL15Q9H469 300 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 EDA2RQ9HAV5 297 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 C12orf10Q9HB07 376 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 MYOZ1Q9NP98 299 aaPredicted RBP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 MIEF1Q9NQG6 463 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 RBM22Q9NW64 420 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 TRMT112Q9UI30 125 aaKnown RBP3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 PSG11Q9UQ72 335 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 SIGLEC9Q9Y336 463 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 ORC6Q9Y5N6 252 aa3.1□□□□□ -1.91
RNU4-60P-201ENST00000517239 CHD2O14647 1828 aaKnown RBP3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF608Q9ULD9 1512 aaPredicted RBP3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 IGLV4-3A0A075B6K6 122 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 IGHV1OR15-1A0A075B7D0 117 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 CIB4A0PJX0 185 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 MFNGO00587 321 aa3.09□□□□□ -1.91
RNU4-60P-201ENST00000517239 KLRC4O43908 158 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms