RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 HPCAL1P37235 193 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 CNN1P51911 297 aaKnown RBP-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 GBE1Q04446 702 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 WDR43Q15061 677 aaKnown RBP eCLIP-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 PLPPR5Q32ZL2 321 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 MPP7Q5T2T1 576 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 FAM159AQ6UWV7 190 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 NPWQ8N729 165 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 OR2T34Q8NGX1 318 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 OR2T3Q8NH03 318 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 ASB13Q8WXK3 278 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 BORCS5Q969J3 196 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 ISG20Q96AZ6 181 aaKnown RBP-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 CFAP36Q96G28 342 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 ERO1AQ96HE7 468 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 Q96MT0 163 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 GBP5Q96PP8 586 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 OR8B4Q96RC9 309 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 SIRPDQ9H106 197 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 TMEM206Q9H813 350 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 LRRC40Q9H9A6 602 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 ANKHQ9HCJ1 492 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 PGAP2Q9UHJ9 254 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 ZNF780BQ9Y6R6 833 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 URGCP-MRPS24S4R325 110 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 ELP1O95163 1332 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 CLDN25C9JDP6 229 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 F5H5P2 479 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 RGS16O15492 202 aaPredicted RBP-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 FGF1P05230 155 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 FGF4P08620 206 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 SPRR2AP35326 72 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 AP3M2P53677 418 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 TAS2R46P59540 309 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 ARHGAP19Q14CB8 494 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 RTL4Q6ZR62 310 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 Q6ZSR6 202 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 C7orf65Q6ZTY9 151 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 CCDC65Q8IXS2 484 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 CPXCR1Q8N123 301 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 OR4M2Q8NGB6 313 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 FAM57AQ8TBR7 257 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 FAM162AQ96A26 154 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 RBM14Q96PK6 669 aaKnown RBP-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 TESK2Q96S53 571 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 HSD3B7Q9H2F3 369 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 TMCO1Q9UM00 188 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 RHBDD3Q9Y3P4 386 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 CCL27Q9Y4X3 112 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 CSPG4Q6UVK1 2322 aa-2.87□□□□□ -2.87
RNU6-539P-201ENST00000516665 CDHR2Q9BYE9 1310 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 DOCK4Q8N1I0 1966 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 H0Y626 953 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 CDC7O00311 574 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 UBE2CO00762 179 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 AREGP15514 252 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 NCF2P19878 526 aaPredicted RBP-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 IL3RAP26951 378 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 CD40LGP29965 261 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 FOXN2P32314 431 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 SSTP61278 116 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 ZNF117Q03924 483 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 TSPAN31Q12999 210 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 QPRTQ15274 297 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 SLC36A3Q495N2 470 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 KCTD21Q4G0X4 260 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 HSP90AB2PQ58FF8 381 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 TCP11X2Q5H9J9 407 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 HHATQ5VTY9 493 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 LINC00575Q6W349 94 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 CLEC4FQ8N1N0 589 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 ARL10Q8N8L6 244 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 FAM133AQ8N9E0 248 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 OR2G2Q8NGZ5 317 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 RXFP4Q8TDU9 374 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 BAALCQ8WXS3 180 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 GLT1D1Q96MS3 346 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 VSTM2LQ96N03 204 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 SECISBP2Q96T21 854 aaKnown RBP-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 OR2D2Q9H210 308 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 RDH8Q9NYR8 311 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 C9orf78Q9NZ63 289 aaPredicted RBP-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 IL36GQ9NZH8 169 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 NOL7Q9UMY1 257 aaKnown RBP-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 DNAH3Q8TD57 4116 aa-2.88□□□□□ -2.87
RNU6-539P-201ENST00000516665 TRAV41A0A0B4J266 112 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 IGSF23A1L1A6 192 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 TRAPPC2LH3BP13 241 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 ADGRB2O60241 1585 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 TCF7P36402 384 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 NDUFA8P51970 172 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 GLO1Q04760 184 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 MESDQ14696 234 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 C6orf99Q4VX62 202 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 AADACL4Q5VUY2 407 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 TRAT1Q6PIZ9 186 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 CCDC73Q6ZRK6 1079 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 FAM19A1Q7Z5A9 133 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 PRR15Q8IV56 129 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 TUSC5Q8IXB3 177 aa-2.89□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms