RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	MPIG6B	O95866	241 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	DHFR	P00374	187 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CST4	P01036	141 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	NGF	P01138	241 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CD74	P04233	296 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	LPL	P06858	475 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	HOXD4	P09016	255 aa	Predicted RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	GSTP1	P09211	210 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	H2AFB2	P0C5Z0	115 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CCL2	P13500	99 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CBR1	P16152	277 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ZNF14	P17017	642 aa	Predicted RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	PSMB1	P20618	241 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CCNO	P22674	350 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	GIF	P27352	417 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	APLNR	P35414	380 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	FAU	P35544	74 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TIMP3	P35625	211 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	WNT5A	P41221	380 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	VEGFC	P49767	419 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	RBP2	P50120	134 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	MECP2	P51608	486 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CCR6	P51684	374 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TDGF1P3	P51864	188 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	FUT6	P51993	359 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ATP1B3	P54709	279 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	UCN	P55089	124 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	MTCP1	P56278	107 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TMEM50B	P56557	158 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ACTB	P60709	375 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	UBE2N	P61088	152 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	RPS27A	P62979	156 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ACTG1	P63261	375 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CD300C	Q08708	224 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	FOXF2	Q12947	444 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	MALL	Q13021	153 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	GK2	Q14410	553 aa	Predicted RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CARTPT	Q16568	116 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TATDN3	Q17R31	274 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	EIF2S3L	Q2VIR3	472 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	PCGF3	Q3KNV8	242 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CDNF	Q49AH0	187 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TMEM255A	Q5JRV8	349 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	PLAC9	Q5JTB6	97 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	C1orf185	Q5T7R7	199 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	SFRP4	Q6FHJ7	346 aa	Predicted RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	VWA1	Q6PCB0	445 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	FAM180A	Q6UWF9	173 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854		Q6ZTK2	550 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	LHFPL2	Q6ZUX7	228 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	MOB3C	Q70IA8	216 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	AKAP14	Q86UN6	197 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CD163	Q86VB7	1156 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	GABRG1	Q8N1C3	465 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	C17orf78	Q8N4C9	275 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CNEP1R1	Q8N9A8	125 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ZNF610	Q8N9Z0	462 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	WDR31	Q8NA23	367 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854		Q8NA96	180 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TMEM229B	Q8NBD8	167 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	DRAXIN	Q8NBI3	349 aa	Predicted RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ACBD4	Q8NC06	268 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CSNK2A3	Q8NEV1	391 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	SLC30A7	Q8NEW0	376 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	STEAP2	Q8NFT2	490 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	OR56B1	Q8NGI3	324 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	FAM57A	Q8TBR7	257 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	NPRL2	Q8WTW4	380 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TNFAIP8L1	Q8WVP5	186 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	STARD4	Q96DR4	205 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	BORCS8	Q96FH0	119 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CPNE2	Q96FN4	548 aa	Predicted RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	WBP1	Q96G27	269 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	RNF170	Q96K19	258 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	MDFI	Q99750	246 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	GAL3ST1	Q99999	423 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	NICN1	Q9BSH3	213 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	URM1	Q9BTM9	101 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TM2D1	Q9BX74	207 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TMEM59	Q9BXS4	323 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ACTR6	Q9GZN1	396 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	CST11	Q9H112	138 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	METTL9	Q9H1A3	318 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	GHITM	Q9H3K2	345 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	POFUT1	Q9H488	388 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ZNF71	Q9NQZ8	489 aa	Predicted RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	PTTG3P	Q9NZH4	202 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	KCNN3	Q9UGI6	736 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ELF5	Q9UKW6	265 aa	Predicted RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ANAPC10	Q9UM13	185 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ING4	Q9UNL4	249 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	PROCR	Q9UNN8	238 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	SLC7A11	Q9UPY5	501 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TP53TG5	Q9Y2B4	290 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	FAM215A	Q9Y5M1	114 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	ALG5	Q9Y673	324 aa		3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TNRC6A	Q8NDV7	1962 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	PHF3	Q92576	2039 aa	Known RBP	3.87	□□□□□ -1.79
ATP2C1-223	ENST00000515854	TRAV6	A0A075B6T7	132 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms