RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 FAM206AQ9NX38 181 aa11.3□□□□□ -0.6
TCOF1-215ENST00000515516 GTF2A1LQ9UNN4 478 aa11.3□□□□□ -0.6
TCOF1-215ENST00000515516 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
TCOF1-215ENST00000515516 A0A1B0GVI7 797 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 CCDC182A6NF36 153 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 SLC22A31A6NKX4 558 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 ZNF732B4DXR9 585 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 ZNF670-ZNF695F2Z2N8 137 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 AKR7A2O43488 359 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 PRKYO43930 277 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 MTRF1O75570 445 aaKnown RBP11.29□□□□□ -0.6
TCOF1-215ENST00000515516 FCGR1AP12314 374 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 GLRA1P23415 457 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 GABRA2P47869 451 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 ROM1Q03395 351 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 CEACAM21Q3KPI0 293 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 FAM76BQ5HYJ3 339 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 CEP78Q5JTW2 689 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 C1orf146Q5VVC0 180 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 STUMQ69YW2 141 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 MOB3CQ70IA8 216 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 TCEANCQ8N8B7 351 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 OR5A2Q8NGI9 324 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 OR51E1Q8TCB6 317 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 SSMEM1Q8WWF3 244 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 SEH1LQ96EE3 360 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 OR8B4Q96RC9 309 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 GPR84Q9NQS5 396 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 ENPP5Q9UJA9 477 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 CAB39Q9Y376 341 aaPredicted RBP11.29□□□□□ -0.6
TCOF1-215ENST00000515516 AP4S1Q9Y587 144 aa11.29□□□□□ -0.6
TCOF1-215ENST00000515516 A0A1B0GUS0 222 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 A0A1B0GW55 424 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 OR5B21A6NL26 309 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-215ENST00000515516 DUX4L2P0CJ85 424 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 DUX4L3P0CJ86 424 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 DUX4L4P0CJ87 422 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 DUX4L5P0CJ88 424 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 DUX4L6P0CJ89 424 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 DUX4L7P0CJ90 424 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 NDUFB7P17568 137 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 EEF1B2P24534 225 aaKnown RBP11.28□□□□□ -0.6
TCOF1-215ENST00000515516 TGM4P49221 684 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 ELF3P78545 371 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-215ENST00000515516 ZNF684Q5T5D7 378 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 ZBTB37Q5TC79 503 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 SLX4IPQ5VYV7 408 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 NXNL2Q5VZ03 156 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 PLCXD3Q63HM9 321 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 DUX4L9Q6RFH8 374 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-215ENST00000515516 ZNF322Q6U7Q0 402 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-215ENST00000515516 FIP1L1Q6UN15 594 aaKnown RBP11.28□□□□□ -0.6
TCOF1-215ENST00000515516 VMO1Q7Z5L0 202 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 GID4Q8IVV7 300 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 PDZD9Q8IXQ8 264 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 SLC35F2Q8IXU6 374 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 LY6G5BQ8NDX9 201 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 OR4F5Q8NH21 305 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 TMEM163Q8TC26 289 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 HPSE2Q8WWQ2 592 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 TTTY10Q9BZA0 68 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 WDR13Q9H1Z4 485 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 MOB1AQ9H8S9 216 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 BEX1Q9HBH7 125 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 NLKQ9UBE8 527 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 DUX4Q9UBX2 424 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 SLC25A10Q9UBX3 287 aaPredicted RBP11.28□□□□□ -0.6
TCOF1-215ENST00000515516 NUFIP1Q9UHK0 495 aaKnown RBP11.28□□□□□ -0.6
TCOF1-215ENST00000515516 COPS3Q9UNS2 423 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 PIGLQ9Y2B2 252 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 POMT1Q9Y6A1 747 aa11.28□□□□□ -0.6
TCOF1-215ENST00000515516 A0A1W2PQ09 198 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 OR2AT4A6NND4 320 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 ZAR1LA6NP61 321 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 LOC110117498-PIK3R3F6TDL0 507 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 MITFO75030 526 aaPredicted RBP11.27□□□□□ -0.61
TCOF1-215ENST00000515516 CIB2O75838 187 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 NRASP01111 189 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 MELTFP08582 738 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 OMGP23515 440 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 CXCR4P61073 352 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 GUCA2AQ02747 115 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 EGR3Q06889 387 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 BLMHQ13867 455 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 BCL2L15Q5TBC7 163 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 BCDIN3DQ7Z5W3 292 aaKnown RBP11.27□□□□□ -0.61
TCOF1-215ENST00000515516 FGFRL1Q8N441 504 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 KIR3DL3Q8N743 410 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 ANGPTL6Q8NI99 470 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 NPRL2Q8WTW4 380 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 IL4I1Q96RQ9 567 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 DCTN5Q9BTE1 182 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 OR51I2Q9H344 312 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 DPAGT1Q9H3H5 408 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 RASL12Q9NYN1 266 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 NBEAL1Q6ZS30 2694 aa11.27□□□□□ -0.61
TCOF1-215ENST00000515516 BTBD17A6NE02 478 aa11.26□□□□□ -0.61
TCOF1-215ENST00000515516 SIGLEC5O15389 551 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms