RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 APOL3O95236 402 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 BAG2O95816 211 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 FAHP16930 419 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 EPHA1P21709 976 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 CD80P33681 288 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 ZNF85Q03923 595 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 PAX8Q06710 450 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 CDONQ4KMG0 1287 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 CLVS2Q5SYC1 327 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 CD276Q5ZPR3 534 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 SFRP4Q6FHJ7 346 aaPredicted RBP10.65□□□□□ -0.7
CLCN3-210ENST00000515420 LYPD2Q6UXB3 125 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 USP43Q70EL4 1123 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 FAM90A1Q86YD7 464 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 PACRGLQ8N7B6 248 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 SCCPDHQ8NBX0 429 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 RORBQ92753 470 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 RNFT2Q96EX2 444 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 MDFIQ99750 246 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 DNTTIP1Q9H147 329 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 PPP1R3EQ9H7J1 279 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 SLC22A13Q9Y226 551 aa10.65□□□□□ -0.7
CLCN3-210ENST00000515420 EXOGQ9Y2C4 368 aaKnown RBP10.65□□□□□ -0.7
CLCN3-210ENST00000515420 KIR2DS1A0A191URI9 304 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 A0A1B0GTI1 187 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ADAM20O43506 726 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ENSAO43768 121 aaKnown RBP10.64□□□□□ -0.71
CLCN3-210ENST00000515420 RPP14O95059 124 aaKnown RBP10.64□□□□□ -0.71
CLCN3-210ENST00000515420 NRASP01111 189 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 LIPFP07098 398 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 UBCP0CG48 685 aaKnown RBP10.64□□□□□ -0.71
CLCN3-210ENST00000515420 EGR1P18146 543 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ADRA2CP18825 462 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 GPM6AP51674 278 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ACTA2P62736 377 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ACTG2P63267 376 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ARMCX4Q5H9R4 360 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ATPAF1Q5TC12 328 aaPredicted RBP10.64□□□□□ -0.71
CLCN3-210ENST00000515420 FDX2Q6P4F2 183 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 KCTD8Q6ZWB6 473 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ACBD7Q8N6N7 88 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 BOLLQ8N9W6 283 aaKnown RBP10.64□□□□□ -0.71
CLCN3-210ENST00000515420 C19orf18Q8NEA5 215 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 OR14K1Q8NGZ2 314 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 SPATA3Q8NHX4 192 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF418Q8TF45 676 aaPredicted RBP10.64□□□□□ -0.71
CLCN3-210ENST00000515420 PPP1R14AQ96A00 147 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 C10orf35Q96D05 121 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 DMRTB1Q96MA1 342 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 FGF23Q9GZV9 251 aaPredicted RBP10.64□□□□□ -0.71
CLCN3-210ENST00000515420 OR51I2Q9H344 312 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 INPP5EQ9NRR6 644 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 CTSZQ9UBR2 303 aa10.64□□□□□ -0.71
CLCN3-210ENST00000515420 A0A1B0GVI7 797 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 DAPL1A0PJW8 107 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 RNF212BA8MTL3 300 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 GPR37O15354 613 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 FADS2O95864 444 aaKnown RBP10.63□□□□□ -0.71
CLCN3-210ENST00000515420 ECDO95905 644 aaPredicted RBP10.63□□□□□ -0.71
CLCN3-210ENST00000515420 DBTP11182 482 aaKnown RBP10.63□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF91Q05481 1191 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 RAB40BQ12829 278 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 CEP78Q5JTW2 689 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 PLCXD3Q63HM9 321 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 LPCAT4Q643R3 524 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 SLC36A1Q7Z2H8 476 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF573Q86YE8 665 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 SYS1Q8N2H4 156 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF555Q8NEP9 628 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF671Q8TAW3 534 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 ZFAND2BQ8WV99 257 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 RPL3LQ92901 407 aaKnown RBP10.63□□□□□ -0.71
CLCN3-210ENST00000515420 LGALS12Q96DT0 336 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 TECTBQ96PL2 329 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 NUDT16L1Q9BRJ7 211 aaKnown RBP10.63□□□□□ -0.71
CLCN3-210ENST00000515420 PLEKHA1Q9HB21 404 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 ACOXLQ9NUZ1 547 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 MRPS18AQ9NVS2 196 aaKnown RBP10.63□□□□□ -0.71
CLCN3-210ENST00000515420 GNG8Q9UK08 70 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 BOLA1Q9Y3E2 137 aa10.63□□□□□ -0.71
CLCN3-210ENST00000515420 RPL36Q9Y3U8 105 aaKnown RBP10.63□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF732B4DXR9 585 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 P2RY10O00398 339 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 TMPRSS2O15393 492 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 SYT7O43581 403 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 IGHA1P01876 353 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 GYPAP02724 150 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
CLCN3-210ENST00000515420 CCR9P51686 369 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 HOXA4Q00056 320 aaPredicted RBP10.62□□□□□ -0.71
CLCN3-210ENST00000515420 MRPL28Q13084 256 aaKnown RBP10.62□□□□□ -0.71
CLCN3-210ENST00000515420 GALEQ14376 348 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 RCN1Q15293 331 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 TP53I3Q53FA7 332 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 WDR38Q5JTN6 314 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 TMEM244Q5VVB8 128 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 STUMQ69YW2 141 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 MOB3CQ70IA8 216 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms