RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 ZNF180Q9UJW8 692 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 COA3Q9Y2R0 106 aaPredicted RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 LRP12Q9Y561 859 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 LRP1BQ9NZR2 4599 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 HTR3EA5X5Y0 456 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 INMTO95050 263 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 CNIH1O95406 144 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 H2AFB1P0C5Y9 115 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 H2AFB2P0C5Z0 115 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 SLC2A1P11166 492 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 DNAJB13P59910 316 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 NAA20P61599 178 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 EMX2Q04743 252 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 MZT1Q08AG7 82 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 MAD2L1Q13257 205 aaPredicted RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 RBM39Q14498 530 aaKnown RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 MINOS1Q5TGZ0 78 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 AGBL2Q5U5Z8 902 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 LCN8Q6JVE9 175 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 BAIAP2L2Q6UXY1 529 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 C5orf56Q8N8D9 126 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 OR4P4Q8NGL7 312 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 OR6T1Q8NGN1 323 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 OR56B4Q8NH76 319 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 NFKBIDQ8NI38 313 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 LRRC8CQ8TDW0 803 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 TMEM255BQ8WV15 326 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 TESCQ96BS2 214 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 C18orf15Q96N68 181 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 PAPOLGQ9BWT3 736 aaKnown RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 TINAGL1Q9GZM7 467 aaPredicted RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 SYT4Q9H2B2 425 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 KLK15Q9H2R5 256 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 BTNL2Q9UIR0 455 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 ADAM18Q9Y3Q7 739 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 MINOS1-NBL1R4GNA1 71 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 RFPL4AA6NLU0 287 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 ANKRD30BLA7E2S9 258 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 RFPL4AL1F8VTS6 287 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 I3L521 148 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 PSMD9O00233 223 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 SLC1A7O00341 560 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 PLIN3O60664 434 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 SLC16A7O60669 478 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 PTP4A3O75365 173 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 DNAJC8O75937 253 aaPredicted RBP2.48□□□□□ -2.01
CHD1-211ENST00000514344 MT-ND1P03886 318 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 FGF4P08620 206 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 OR8U9P0C7N5 309 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 ZNF728P0DKX0 622 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 INAFM2P0DMQ5 153 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 TROVE2P10155 538 aaKnown RBP eCLIP2.48□□□□□ -2.01
CHD1-211ENST00000514344 KRT4P19013 534 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 ARHGDIBP52566 201 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 ISL1P61371 349 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 UFM1P61960 85 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 PITPNAQ00169 270 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 CAV1Q03135 178 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 FOXE3Q13461 319 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 GFOD2Q3B7J2 385 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 GLYATL3Q5SZD4 288 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 NANOGP8Q6NSW7 305 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 ZNF613Q6PF04 617 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 TMEM65Q6PI78 240 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 LCA5Q86VQ0 697 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 OR6V1Q8N148 313 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 GJC3Q8NFK1 279 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 OR51A7Q8NH64 312 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 TRMT10AQ8TBZ6 339 aaKnown RBP2.48□□□□□ -2.01
CHD1-211ENST00000514344 FNDC8Q8TC99 324 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 PKNOX2Q96KN3 472 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 FMO2Q99518 471 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 DGCR6LQ9BY27 220 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 RAB17Q9H0T7 212 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 AKTIPQ9H8T0 292 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 GRPEL1Q9HAV7 217 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 SLAMF8Q9P0V8 285 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 DPM3Q9P2X0 92 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 DCDC2Q9UHG0 476 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 PYCARDQ9ULZ3 195 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 LHFPL6Q9Y693 200 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 AGRNO00468 2067 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 TRAV27A0A087WT01 109 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 TEX13CA0A0J9YWL9 993 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 NCBP2LA6PVI3 153 aaKnown RBP2.48□□□□□ -2.01
CHD1-211ENST00000514344 C17orf98A8MV24 154 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 M0R135 149 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 COPEO14579 308 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 OR7A10O76100 309 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 OR5F1O95221 314 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 IGHG2P01859 326 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 FAM153BP0C7A2 387 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 KITP10721 976 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 CDC25BP30305 580 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 RPS27P42677 84 aaKnown RBP2.48□□□□□ -2.01
CHD1-211ENST00000514344 DLX6P56179 175 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 TXNL4AP83876 142 aaKnown RBP2.48□□□□□ -2.01
CHD1-211ENST00000514344 PCLAFQ15004 111 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 DUSP7Q16829 419 aa2.48□□□□□ -2.01
CHD1-211ENST00000514344 DPY19L1Q2PZI1 675 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms