RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 F12P00748 615 aaPredicted RBP17.1■□□□□ 0.33
USP53-208ENST00000514305 NRASP01111 189 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 IGHV1-46P01743 117 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 TPBGQ13641 420 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 LINC01559Q495D7 138 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 UBE2UQ5VVX9 321 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 SERPINA12Q8IW75 414 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 OR5D14Q8NGL3 314 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 ERGIC1Q969X5 290 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 RTL8AQ9BWD3 113 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 TPK1Q9H3S4 243 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 SAP30LQ9HAJ7 183 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 ZNF275Q9NSD4 429 aaPredicted RBP17.1■□□□□ 0.33
USP53-208ENST00000514305 RHBDD3Q9Y3P4 386 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 ARFGEF3Q5TH69 2177 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 DNHD1Q96M86 4753 aa17.1■□□□□ 0.33
USP53-208ENST00000514305 A0A096LNT2 108 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 A0A1B0GWJ7 208 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 ZSCAN5BA6NJL1 495 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 LALBAP00709 142 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 CPEP16870 476 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 ACKR3P25106 362 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 MRPS11P82912 194 aaKnown RBP17.09■□□□□ 0.33
USP53-208ENST00000514305 PRDX4Q13162 271 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 CNN3Q15417 329 aaKnown RBP17.09■□□□□ 0.33
USP53-208ENST00000514305 TSTQ16762 297 aaKnown RBP17.09■□□□□ 0.33
USP53-208ENST00000514305 Q499Y3 187 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 ARMCX4Q5H9R4 360 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 XAF1Q6GPH4 301 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 ZFP41Q8N8Y5 198 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 C10orf105Q8TEF2 133 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 CKLFQ9UBR5 152 aa17.09■□□□□ 0.33
USP53-208ENST00000514305 PNMA8CA0A1B0GUJ8 204 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 TMEM210A6NLX4 147 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 ZNF850A8MQ14 1090 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 FAHP16930 419 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 PCMT1P22061 227 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 ANOS1P23352 680 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 PSMB9P28065 219 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 CEACAM21Q3KPI0 293 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 Q6ZR03 302 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 KCTD8Q6ZWB6 473 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 MOB3CQ70IA8 216 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 OR5A2Q8NGI9 324 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 FGGYQ96C11 551 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 CPNE2Q96FN4 548 aaPredicted RBP17.08■□□□□ 0.32
USP53-208ENST00000514305 SORCS2Q96PQ0 1159 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 CDC42EP3Q9UKI2 254 aa17.08■□□□□ 0.32
USP53-208ENST00000514305 ATRQ13535 2644 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 ANKRD61A6NGH8 418 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 OR5B21A6NL26 309 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 MAGEB3O15480 346 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 PRKACBP22694 351 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 CD200P41217 278 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 PDLIM4P50479 330 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 CCL8P80075 99 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 TMEM255AQ5JRV8 349 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 LIPKQ5VXJ0 399 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 PLCXD3Q63HM9 321 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 UTS2BQ765I0 119 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 UBASH3BQ8TF42 649 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 PHYHIPQ92561 330 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 RDH5Q92781 318 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 PGLYRP3Q96LB9 341 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 OR2V2Q96R30 315 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 SOX7Q9BT81 388 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 CHST5Q9GZS9 411 aa17.07■□□□□ 0.32
USP53-208ENST00000514305 SIRT4Q9Y6E7 314 aaPredicted RBP17.07■□□□□ 0.32
USP53-208ENST00000514305 FBN1P35555 2871 aaKnown RBP17.07■□□□□ 0.32
USP53-208ENST00000514305 COL6A5A8TX70 2615 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 ANK3Q12955 4377 aaKnown RBP17.06■□□□□ 0.32
USP53-208ENST00000514305 LRRC30A6NM36 301 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 H3BSH0 61 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 CCRL2O00421 344 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 LY6HO94772 140 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 HLA-DPB1P04440 258 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 IRF2P14316 349 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 USF1P22415 310 aaPredicted RBP17.06■□□□□ 0.32
USP53-208ENST00000514305 MAGEB1P43366 347 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 PPP3R1P63098 170 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 GNG3P63215 75 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 HFEQ30201 348 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 TMEM42Q69YG0 159 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 CYB5R2Q6BCY4 276 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 ZCCHC24Q8N2G6 241 aaKnown RBP17.06■□□□□ 0.32
USP53-208ENST00000514305 PARP16Q8N5Y8 322 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 OR10AD1Q8NGE0 317 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 TMEM106AQ96A25 262 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 RNF170Q96K19 258 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 MEGF10Q96KG7 1140 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 OPALINQ96PE5 141 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 PIMREGQ9BSJ6 248 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 ZCCHC4Q9H5U6 513 aa17.06■□□□□ 0.32
USP53-208ENST00000514305 NDUFS8O00217 210 aa17.05■□□□□ 0.32
USP53-208ENST00000514305 MLNRO43193 412 aa17.05■□□□□ 0.32
USP53-208ENST00000514305 LILRA1O75019 489 aa17.05■□□□□ 0.32
USP53-208ENST00000514305 DAOP14920 347 aa17.05■□□□□ 0.32
USP53-208ENST00000514305 GABRA5P31644 462 aa17.05■□□□□ 0.32
USP53-208ENST00000514305 CRYBB2P43320 205 aa17.05■□□□□ 0.32
USP53-208ENST00000514305 FUT6P51993 359 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms