RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GLDNQ6ZMI3 551 aaPredicted RBP12.93□□□□□ -0.34
VCAN-211ENST00000513984 RTN4RL2Q86UN3 420 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 NOXA1Q86UR1 476 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 GCNT2Q8N0V5 402 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 BEST4Q8NFU0 473 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 OR11H7Q8NGC8 314 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 BORCS8Q96FH0 119 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 ZNF486Q96H40 463 aaPredicted RBP12.93□□□□□ -0.34
VCAN-211ENST00000513984 ZNF75AQ96N20 296 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 GINS4Q9BRT9 223 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 BEX1Q9HBH7 125 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 ANAPC10Q9UM13 185 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 SVILO95425 2214 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 FAM230AA0A1W2PPH8 454 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 AHRRA9YTQ3 701 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 PYCARD-AS1I3L0S3 204 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 ZNHIT1O43257 154 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 HPXP02790 462 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 PDGFAP04085 211 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 ZNF735P0CB33 412 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 FUT6P51993 359 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 MEF2DQ14814 521 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 ACSF3Q4G176 576 aaPredicted RBP12.92□□□□□ -0.34
VCAN-211ENST00000513984 LIX1LQ8IVB5 337 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 OR51T1Q8NGJ9 327 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 OR5M9Q8NGP3 310 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 OR10K1Q8NGX5 313 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 TINAGL1Q9GZM7 467 aaPredicted RBP12.92□□□□□ -0.34
VCAN-211ENST00000513984 OPA3Q9H6K4 179 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 M0QYG6 137 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 C1QBP02746 253 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 SULT1A3P0DMM9 295 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 SULT1A4P0DMN0 295 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 TMEM225BP0DP42 221 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 IGHV1-2P23083 117 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 CPT2P23786 658 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 MPZP25189 248 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 APLNRP35414 380 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 RAD52P43351 418 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 GNG2P59768 71 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 TGFBR3Q03167 851 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 MALLQ13021 153 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 Q6ZT83 130 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 MDP1Q86V88 176 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 GVQW1Q8N7I0 195 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 C9orf106Q8NAJ2 232 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 OR4S1Q8NGB4 309 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 OR56B2PQ8NGI1 322 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 DACT3Q96B18 629 aaPredicted RBP12.92□□□□□ -0.34
VCAN-211ENST00000513984 ARHGAP5-AS1Q96IT6 56 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 METTL9Q9H1A3 318 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 IFT46Q9NQC8 304 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
VCAN-211ENST00000513984 AMY2AP04746 511 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 NAT1P18440 290 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
VCAN-211ENST00000513984 TBPP20226 339 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 KIR2DL2P43627 348 aaPredicted RBP12.91□□□□□ -0.34
VCAN-211ENST00000513984 ATP1B3P54709 279 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 FOXC1Q12948 553 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 PLCXD3Q63HM9 321 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 OR2A2Q6IF42 318 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 RPUSD3Q6P087 351 aaKnown RBP12.91□□□□□ -0.34
VCAN-211ENST00000513984 SEZ6L2Q6UXD5 910 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 MOB3CQ70IA8 216 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 MRPL21Q7Z2W9 205 aaKnown RBP12.91□□□□□ -0.34
VCAN-211ENST00000513984 CCDC36Q8IYA8 594 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 RBMXL3Q8N7X1 1067 aaKnown RBP12.91□□□□□ -0.34
VCAN-211ENST00000513984 OR6K3Q8NGY3 331 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 PIGCQ92535 297 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 Q96M66 194 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 SLC25A21Q9BQT8 299 aaPredicted RBP12.91□□□□□ -0.34
VCAN-211ENST00000513984 SLC2A8Q9NY64 477 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 STARD10Q9Y365 291 aa12.91□□□□□ -0.34
VCAN-211ENST00000513984 SNRPGP15A8MWD9 76 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 RAD51DO75771 328 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 NGFP01138 241 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 ARL6IP1Q15041 203 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 RNASE10Q5GAN6 216 aaKnown RBP12.9□□□□□ -0.34
VCAN-211ENST00000513984 NSUN5P2Q63ZY6 315 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 ZNF626Q68DY1 528 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 SLC36A1Q7Z2H8 476 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 BPIFB2Q8N4F0 458 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 PXT1Q8NFP0 134 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 BOD1Q96IK1 185 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 SEC22CQ9BRL7 303 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 ELL3Q9HB65 397 aaPredicted RBP12.9□□□□□ -0.34
VCAN-211ENST00000513984 GPN1Q9HCN4 374 aaPredicted RBP12.9□□□□□ -0.34
VCAN-211ENST00000513984 IL36GQ9NZH8 169 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 SCP2D1Q9UJQ7 156 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 DISC1C4P0D8 188 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 SPRY1O43609 319 aaPredicted RBP12.9□□□□□ -0.34
VCAN-211ENST00000513984 SSNA1O43805 119 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 ZNF780AO75290 641 aaPredicted RBP12.9□□□□□ -0.34
VCAN-211ENST00000513984 CA11O75493 328 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 CST4P01036 141 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 VSIG10L2P0DP72 767 aa12.9□□□□□ -0.34
VCAN-211ENST00000513984 ANXA3P12429 323 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms