RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 RNF144BQ7Z419 303 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 GLCCI1Q86VQ1 547 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 ZNF101Q8IZC7 436 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 ZSCAN4Q8NAM6 433 aaPredicted RBP7.24□□□□□ -1.25
RNF4-220ENST00000513578 Q8NFD4 153 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 OR5L1Q8NGL2 311 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 TNFAIP8L1Q8WVP5 186 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 GCDHQ92947 438 aaPredicted RBP7.24□□□□□ -1.25
RNF4-220ENST00000513578 MRPS24Q96EL2 167 aaKnown RBP7.24□□□□□ -1.25
RNF4-220ENST00000513578 ST6GAL2Q96JF0 529 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 HS3ST6Q96QI5 342 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 TMEM59Q9BXS4 323 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 GHITMQ9H3K2 345 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 MOV10Q9HCE1 1003 aaKnown RBP7.24□□□□□ -1.25
RNF4-220ENST00000513578 PCDHB16Q9NRJ7 776 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 GPR173Q9NS66 373 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 SLC7A11Q9UPY5 501 aa7.24□□□□□ -1.25
RNF4-220ENST00000513578 INTS1Q8N201 2190 aaKnown RBP7.24□□□□□ -1.25
RNF4-220ENST00000513578 MYO18BQ8IUG5 2567 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 A0A0A6YYD4 124 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 C5orf49A4QMS7 147 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 PRSS44E7EML9 344 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 MFNGO00587 321 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 RRP8O43159 456 aaKnown RBP7.23□□□□□ -1.25
RNF4-220ENST00000513578 PEX14O75381 377 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 TNFSF13O75888 250 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 MPIG6BO95866 241 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 MT-ND4P03905 459 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 IL5P05113 134 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 TPOP07202 933 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 PTHLHP12272 177 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 CBR1P16152 277 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 HIST1H1DP16402 221 aaKnown RBP7.23□□□□□ -1.25
RNF4-220ENST00000513578 CPT2P23786 658 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 PMELP40967 661 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 CBX5P45973 191 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 VEGFCP49767 419 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 MTCP1P56278 107 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 TMEM50BP56557 158 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 RRAS2P62070 204 aaPredicted RBP7.23□□□□□ -1.25
RNF4-220ENST00000513578 GUCA2AQ02747 115 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 MRPL49Q13405 166 aaKnown RBP7.23□□□□□ -1.25
RNF4-220ENST00000513578 GK2Q14410 553 aaPredicted RBP7.23□□□□□ -1.25
RNF4-220ENST00000513578 MEF2DQ14814 521 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 P2RY6Q15077 328 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 TBR1Q16650 682 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 CDNFQ49AH0 187 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 HIKESHIQ53FT3 197 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 TMEM255AQ5JRV8 349 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 C1orf185Q5T7R7 199 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 STEAP1BQ6NZ63 245 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 MTFR2Q6P444 385 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 Q6ZTK2 550 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 MDP1Q86V88 176 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 C1orf174Q8IYL3 243 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 SAXO1Q8IYX7 474 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 FTMTQ8N4E7 242 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 ACBD4Q8NC06 268 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 TMEM104Q8NE00 496 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 OR4C16Q8NGL9 310 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 BORCS8Q96FH0 119 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 SPACA5Q96QH8 159 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 S100A13Q99584 98 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 NKX3-1Q99801 234 aaPredicted RBP7.23□□□□□ -1.25
RNF4-220ENST00000513578 SLX1AQ9BQ83 275 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 OCSTAMPQ9BR26 566 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 KRTAP3-3Q9BYR6 98 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 ALX4Q9H161 411 aaPredicted RBP7.23□□□□□ -1.25
RNF4-220ENST00000513578 METTL9Q9H1A3 318 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 C20orf85Q9H1P6 137 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 MYOZ1Q9NP98 299 aaPredicted RBP7.23□□□□□ -1.25
RNF4-220ENST00000513578 NPDC1Q9NQX5 325 aaPredicted RBP7.23□□□□□ -1.25
RNF4-220ENST00000513578 NUDT15Q9NV35 164 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 SLC2A8Q9NY64 477 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 HSF4Q9ULV5 492 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 ING4Q9UNL4 249 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 STARD10Q9Y365 291 aa7.23□□□□□ -1.25
RNF4-220ENST00000513578 IGKV1-27A0A075B6S5 117 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 A0A0A6YYJ9 748 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 A0A1B0GUH1 482 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A10PA6NDY2 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A18PA6NE21 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A16PA6NEW6 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A20PA6NIJ5 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A8PA6NJQ4 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A7PA6NKC0 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FIGNL2A6NMB9 653 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 SERPINE3A8MV23 424 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A22PA8MWA6 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A12PA8MX19 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A5PA8MXJ8 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A23PA8MXZ1 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 K7EM74 188 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 TPD52L2O43399 206 aaKnown RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 CRTAPO75718 401 aaPredicted RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 IGKV3-15P01624 115 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A15PP0C7V4 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A13PP0C7W8 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM90A14PP0C7W9 464 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms