RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CLIP4Q8N3C7 705 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 C11orf42Q8N5U0 333 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 ANKFN1Q8N957 763 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 GJC3Q8NFK1 279 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 OR5J2Q8NH18 312 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 PIFOQ8TCI5 191 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 ISOC1Q96CN7 298 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 RASD2Q96D21 266 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 URB1-AS1Q96HZ7 61 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 ZIM3Q96PE6 472 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 ASCL2Q99929 193 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 TMEM43Q9BTV4 400 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 OR2H1Q9GZK4 316 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 SLC22A4Q9H015 551 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 SEMA6AQ9H2E6 1030 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 DPH5Q9H2P9 285 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 TUBB1Q9H4B7 451 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 METTL8Q9H825 291 aaKnown RBP2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 EDA2RQ9HAV5 297 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 TAS2R5Q9NYW4 299 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 PPP2R2CQ9Y2T4 447 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 STARD10Q9Y365 291 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 UTP11Q9Y3A2 253 aaKnown RBP2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 NOP16Q9Y3C1 178 aaKnown RBP2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 SMAD5-AS1Q9Y6J3 95 aa2.9□□□□□ -1.95
PDLIM5-218ENST00000513341 DNAH10Q8IVF4 4471 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 IGKV1D-42A0A075B6H8 117 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 IGHV4-28A0A0C4DH34 117 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 ELOVL7A1L3X0 281 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 OOEPA6NGQ2 149 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 NKX6-3A6NJ46 265 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 C12orf71A8MTZ7 269 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 M0R1W7 72 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 RNF13O43567 381 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 SYNGR1O43759 233 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CHST1O43916 411 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 OR10H3O60404 316 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 GMDSO60547 372 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 PEX11AO75192 247 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CPSF4O95639 269 aaKnown RBP2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 KRT75O95678 551 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 LCATP04180 440 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 VIMP08670 466 aaKnown RBP2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 MYL2P10916 166 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 MUC1P15941 1255 aaPredicted RBP2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 ACADSP16219 412 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CDAP32320 146 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CD200P41217 278 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 DYNLT3P51808 116 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 RAD23AP54725 363 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 EMX2Q04743 252 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 MAB21L1Q13394 359 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CASP8Q14790 479 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CLEC12AQ5QGZ9 265 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 FAM201AQ5SY85 155 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 ZFAND6Q6FIF0 208 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 OR4F3Q6IEY1 312 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 C8orf82Q6P1X6 216 aaPredicted RBP2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 ZYG11AQ6WRX3 759 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 ADAMTSL5Q6ZMM2 481 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 SLC36A1Q7Z2H8 476 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 C16orf82Q7Z2V1 217 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 HMGN2P46Q86SG4 172 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 NUDCD3Q8IVD9 361 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 SBSPONQ8IVN8 264 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CLECL1Q8IZS7 167 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CLEC4FQ8N1N0 589 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 KRTCAP2Q8N6L1 136 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CLDN22Q8N7P3 220 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 Q8N7P7 452 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 PRR26Q8N8Z3 221 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 OR4X2Q8NGF9 303 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 OR5D13Q8NGL4 314 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 OR4A15Q8NGL6 344 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 AKR7LQ8NHP1 331 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 GATAD1Q8WUU5 269 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 MYDGFQ969H8 173 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 NABP1Q96AH0 204 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 TESCQ96BS2 214 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 RBP7Q96R05 134 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 PAFAH2Q99487 392 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 RAB17Q9H0T7 212 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 DNTTIP1Q9H147 329 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 WNT5BQ9H1J7 359 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 MMADHCQ9H3L0 296 aaPredicted RBP2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 MUC13Q9H3R2 512 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CACYBPQ9HB71 228 aaKnown RBP2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 TMEM27Q9HBJ8 222 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 BCL2L10Q9HD36 194 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 SIRT7Q9NRC8 400 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 PCDHB16Q9NRJ7 776 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 KRT84Q9NSB2 600 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 ZFP57Q9NU63 452 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 CTSZQ9UBR2 303 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 BTNL2Q9UIR0 455 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 HAO1Q9UJM8 370 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 TMCC3Q9ULS5 477 aa2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 PRPF19Q9UMS4 504 aaKnown RBP2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 ZNF443Q9Y2A4 671 aaPredicted RBP2.89□□□□□ -1.95
PDLIM5-218ENST00000513341 SAR1BQ9Y6B6 198 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms