RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 GNALP38405 381 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 SLC9A3P48764 834 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 ESRRGP62508 458 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 ZNF45Q02386 682 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 SNAI3Q3KNW1 292 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 NANOGP8Q6NSW7 305 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 ZBTB49Q6ZSB9 765 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 THAP5Q7Z6K1 395 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 LNX2Q8N448 690 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 AGR3Q8TD06 166 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 OVOL2Q9BRP0 275 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 C1orf21Q9H246 121 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 RAD21L1Q9H4I0 556 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 TPT1P8Q9HAU6 139 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 KRCC1Q9NPI7 259 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-208ENST00000512813 ING3Q9NXR8 418 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 SLC7A7Q9UM01 511 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 POLR1DQ9Y2S0 133 aa7.13□□□□□ -1.27
CLCN3-208ENST00000512813 PRORSD1PA6NEY8 169 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 CPSF4LA6NMK7 179 aaKnown RBP7.12□□□□□ -1.27
CLCN3-208ENST00000512813 C5orf58C9J3I9 102 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 SLC22A2O15244 555 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 OR5F1O95221 314 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 FAM106CPP0CH98 169 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 PIPP12273 146 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-208ENST00000512813 BMP2P12643 396 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 CPA3P15088 417 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 ANOS1P23352 680 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 GLRA1P23415 457 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 TCTAP57738 103 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 KIAA0141Q14154 515 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-208ENST00000512813 KCNMB1Q16558 191 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 CCDC153Q494R4 210 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 ENTPD8Q5MY95 495 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 GLYATL3Q5SZD4 288 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 KRT73Q86Y46 540 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 THNSL2Q86YJ6 484 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 ANKRD13BQ86YJ7 626 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 CNPY4Q8N129 248 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 ZNF645Q8N7E2 425 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 ZNF491Q8N8L2 437 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 RPL3LQ92901 407 aaKnown RBP7.12□□□□□ -1.27
CLCN3-208ENST00000512813 SGTBQ96EQ0 304 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 OR52E6Q96RD3 313 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 TINAGL1Q9GZM7 467 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-208ENST00000512813 YY1AP1Q9H869 796 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 PLEKHA3Q9HB20 300 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 VSIG4Q9Y279 399 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 PPP2R2CQ9Y2T4 447 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 SESN1Q9Y6P5 492 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 HMCN2Q8NDA2 5059 aa7.12□□□□□ -1.27
CLCN3-208ENST00000512813 TRAPPC13A5PLN9 417 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A18PA6NE21 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A16PA6NEW6 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A20PA6NIJ5 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A9PA6NNJ1 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A12PA8MX19 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A5PA8MXJ8 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 LEUTXA8MZ59 168 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 EPM2AB3EWF7 344 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 LINC01619G3V211 115 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 SLC1A7O00341 560 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 RFXANKO14593 260 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 AHCYL1O43865 530 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 TFAP2AP05549 437 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A15PP0C7V4 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A13PP0C7W8 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A14PP0C7W9 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 FAM90A24PP0C7X0 464 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 DDOSTP39656 456 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 BDH1Q02338 343 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 LYG2Q86SG7 212 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 TSPYL5Q86VY4 417 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-208ENST00000512813 ZNF561Q8N587 486 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 CD177Q8N6Q3 437 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 PFN4Q8NHR9 129 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 VPS33AQ96AX1 596 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 ZIM3Q96PE6 472 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 OR5B12Q96R08 314 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 PRSS27Q9BQR3 290 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 TMEM133Q9H2Q1 129 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 OPA3Q9H6K4 179 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 DSCAML1Q8TD84 2053 aa7.11□□□□□ -1.27
CLCN3-208ENST00000512813 OR6C68A6NDL8 312 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 TMEM210A6NLX4 147 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 H0Y980 276 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 M0R135 149 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 RRP9O43818 475 aaKnown RBP7.1□□□□□ -1.27
CLCN3-208ENST00000512813 MTRF1O75570 445 aaKnown RBP7.1□□□□□ -1.27
CLCN3-208ENST00000512813 VIMP08670 466 aaKnown RBP7.1□□□□□ -1.27
CLCN3-208ENST00000512813 ZCCHC18P0CG32 403 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 GCAP28676 217 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 MNDAP41218 407 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 TPTEP56180 551 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 PCLAFQ15004 111 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 RGNQ15493 299 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 RFX4Q33E94 735 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 AGBL2Q5U5Z8 902 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 CORO6Q6QEF8 472 aa7.1□□□□□ -1.27
CLCN3-208ENST00000512813 KCTD8Q6ZWB6 473 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms