RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FTH1P02794 183 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 IFNA16P05015 189 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 HLA-DQB2P05538 268 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 OR4A8P0C604 315 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF735P0CB33 412 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 ANXA3P12429 323 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 NCF2P19878 526 aaPredicted RBP2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 TGFBR2P37173 567 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 SSR1P43307 286 aaKnown RBP2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 PRRX1P54821 245 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 RPS15AP62244 130 aaKnown RBP2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 SELPLGQ14242 412 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 GRB7Q14451 532 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 KIAA0040Q15053 153 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 DEFB134Q4QY38 66 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 TEX44Q53QW1 395 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 TTC23Q5W5X9 447 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 UFSP1Q6NVU6 142 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 Q6ZT83 130 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 VN1R4Q7Z5H5 301 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 TMEM17Q86X19 198 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 BBOF1Q8ND07 529 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 AGR3Q8TD06 166 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 GIMAP1Q8WWP7 306 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 RAD51AP1Q96B01 352 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 SDSLQ96GA7 329 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 TMEM80Q96HE8 168 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 PANX2Q96RD6 677 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 TRIB3Q96RU7 358 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 KCNS3Q9BQ31 491 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 TPK1Q9H3S4 243 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 DHX35Q9H5Z1 703 aaKnown RBP2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 METTL7AQ9H8H3 244 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 MEAF6Q9HAF1 191 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 CA10Q9NS85 328 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 RBM22Q9NW64 420 aaKnown RBP eCLIP2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 MRPL39Q9NYK5 338 aaKnown RBP2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 SPATA7Q9P0W8 599 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 MCTS1Q9ULC4 181 aaKnown RBP2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 WDR45Q9Y484 360 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 USH1CQ9Y6N9 552 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 FAT2Q9NYQ8 4349 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 IGLV8-61A0A075B6I0 122 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 A0A075B6Q4 140 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 KCNE1BA0A087WTH5 132 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 A0A1W2PPV9 198 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 BTBD17A6NE02 478 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 FAM74A7A6NL05 159 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 E9PLD3 99 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 CETN3O15182 167 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 STX7O15400 261 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 SCGNO76038 276 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 LSM8O95777 96 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 IGHMP01871 453 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 CD55P08174 381 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 OR12D1P0DN82 309 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 PTBP1P26599 531 aaKnown RBP eCLIP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 HCAR3P49019 387 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 EFNB2P52799 333 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 SUCLG1P53597 346 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 FBXW4P57775 412 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 RND3P61587 244 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 RPL32P62910 135 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 RPL8P62917 257 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 MRPS11P82912 194 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 RIPPLY1Q0D2K3 151 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 SLAMF1Q13291 335 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 GANABQ14697 944 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 ATXN7L3Q14CW9 347 aaPredicted RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 PRR4Q16378 134 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 FAM74A3Q4VXF1 159 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 PVRIGQ6DKI7 326 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 TMEM225Q6GV28 225 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 BRD3OSQ6XYD6 125 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 C16orf62Q7Z3J2 963 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 ZCCHC24Q8N2G6 241 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 UBE2J2Q8N2K1 259 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 CLDN19Q8N6F1 224 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 C15orf54Q8N8G6 183 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF321PQ8N8H1 164 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 OR8K1Q8NGG5 319 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 OR52K1Q8NGK4 314 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 JOSD2Q8TAC2 188 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 FAM110BQ8TC76 370 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 RAB8BQ92930 207 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 C7orf34Q96L11 122 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 KIR2DL4Q99706 377 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 GAL3ST1Q99999 423 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 RHOXF2Q9BQY4 288 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 TM2D3Q9BRN9 247 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 TMEM43Q9BTV4 400 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 TSSK1BQ9BXA7 367 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 OSBPL11Q9BXB4 747 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 YTHDF1Q9BYJ9 559 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 RHBGQ9H310 441 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 RHOJQ9H4E5 214 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 YY1AP1Q9H869 796 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 PRTFDC1Q9NRG1 225 aa2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 PAQR5Q9NXK6 330 aaPredicted RBP2.49□□□□□ -2.01
TOPBP1-208ENST00000511439 TAC3Q9UHF0 121 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms