RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 POLR3HQ9Y535 204 aaPredicted RBP4.67□□□□□ -1.66
USP53-206ENST00000510737 MAB21L2Q9Y586 359 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 KMT2AQ03164 3969 aa4.67□□□□□ -1.66
USP53-206ENST00000510737 CCDC189A1A4V9 331 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 FTCDNL1E5RQL4 147 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 H3BUX3 64 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 RAD51CO43502 376 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 KLHL2O95198 593 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 SNAP29O95721 258 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 CYB5R3P00387 301 aaPredicted RBP4.66□□□□□ -1.66
USP53-206ENST00000510737 KRT6AP02538 564 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 KRT6BP04259 564 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 RPS17P08708 135 aaKnown RBP4.66□□□□□ -1.66
USP53-206ENST00000510737 TFPTP0C1Z6 253 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 ZNF43P17038 809 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 GTF2E2P29084 291 aaKnown RBP4.66□□□□□ -1.66
USP53-206ENST00000510737 KRT6CP48668 564 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 KIAA0040Q15053 153 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 CHI3L2Q15782 390 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 ZNF404Q494X3 552 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 METTL11BQ5VVY1 283 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 CARD17Q5XLA6 110 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 NHLRC1Q6VVB1 395 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 Q6ZR03 302 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 Q6ZVH6 145 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 HMGN2P46Q86SG4 172 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 ZNF101Q8IZC7 436 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 OR8B3Q8NGG8 313 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 C8orf46Q8TAG6 207 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 ZNF420Q8TAQ5 688 aaPredicted RBP4.66□□□□□ -1.66
USP53-206ENST00000510737 KLF14Q8TD94 323 aaPredicted RBP4.66□□□□□ -1.66
USP53-206ENST00000510737 ITLN1Q8WWA0 313 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 NSMAFQ92636 917 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 MS4A14Q96JA4 679 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 OXGR1Q96P68 337 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 OR5M11Q96RB7 305 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 OR8B2Q96RD0 313 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 SH3GL3Q99963 347 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 DESI2Q9BSY9 194 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 EMC6Q9BV81 110 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 TAPBPLQ9BX59 468 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 OR2J1Q9GZK6 312 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 IQCGQ9H095 443 aaKnown RBP4.66□□□□□ -1.66
USP53-206ENST00000510737 RANBP3Q9H6Z4 567 aaPredicted RBP4.66□□□□□ -1.66
USP53-206ENST00000510737 ZNF702PQ9H963 129 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 B3GAT2Q9NPZ5 323 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 FBXL3Q9UKT7 428 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 TIMM22Q9Y584 194 aa4.66□□□□□ -1.66
USP53-206ENST00000510737 DNAH11Q96DT5 4516 aa4.65□□□□□ -1.66
USP53-206ENST00000510737 A0A1W2PRD5 423 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 A0A1W2PRF3 423 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 A0A1W2PRM7 423 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 FAM159BA6NKW6 160 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 PHYHO14832 338 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 CHST1O43916 411 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 TBX19O60806 448 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 RAMP3O60896 148 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 NPIPB7O75200 414 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 STX11O75558 287 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 FCN3O75636 299 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 OR2T7P0C7T2 308 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 SMIM18P0DKX4 95 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 PNMTP11086 282 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 CXCR1P25024 350 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 SPRP35270 261 aaPredicted RBP4.65□□□□□ -1.67
USP53-206ENST00000510737 PSMB10P40306 273 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 PMELP40967 661 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 ACAA2P42765 397 aaKnown RBP4.65□□□□□ -1.67
USP53-206ENST00000510737 CRATP43155 626 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 CCT3P49368 545 aaKnown RBP4.65□□□□□ -1.67
USP53-206ENST00000510737 DLX1P56177 255 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 PSG7Q13046 419 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 PDIA2Q13087 525 aaKnown RBP4.65□□□□□ -1.67
USP53-206ENST00000510737 WDR88Q6ZMY6 472 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 VMO1Q7Z5L0 202 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 VRK2Q86Y07 508 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 LRRC8AQ8IWT6 810 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 Q8N2B8 174 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 PNKDQ8N490 385 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 SLC22A24Q8N4F4 322 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 ARFGAP2Q8N6H7 521 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 OR2Z1Q8NG97 314 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 PIFOQ8TCI5 191 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 GRK7Q8WTQ7 553 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 NPRL2Q8WTW4 380 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 DCAKDQ8WVC6 231 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 C17orf50Q8WW18 174 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 RORBQ92753 470 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 RFT1Q96AA3 541 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 KCNA7Q96RP8 456 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 SSX3Q99909 188 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 SLC19A3Q9BZV2 496 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 PARLQ9H300 379 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 REEP4Q9H6H4 257 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 EXOSC3Q9NQT5 275 aaKnown RBP4.65□□□□□ -1.67
USP53-206ENST00000510737 TXNDC16Q9P2K2 825 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 IL19Q9UHD0 177 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 SLC35A3Q9Y2D2 325 aa4.65□□□□□ -1.67
USP53-206ENST00000510737 CAB39Q9Y376 341 aaPredicted RBP4.65□□□□□ -1.67
USP53-206ENST00000510737 TANC2Q9HCD6 1990 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms