RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 DMRTC1Q5HYR2 192 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 STUMQ69YW2 141 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 ZNF322Q6U7Q0 402 aaPredicted RBP14.8□□□□□ -0.04
TPM3-220ENST00000509601 Q6YL49 198 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 ZNF788Q6ZQV5 615 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 SLC36A1Q7Z2H8 476 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 ZDHHC13Q8IUH4 622 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 OR51E1Q8TCB6 317 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 ST8SIA4Q92187 359 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 ITFG2Q969R8 447 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 SLC25A28Q96A46 364 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 HIST1H2AAQ96QV6 131 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 IL4I1Q96RQ9 567 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 CNN2Q99439 309 aaKnown RBP14.8□□□□□ -0.04
TPM3-220ENST00000509601 ZNF747Q9BV97 191 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 GPR84Q9NQS5 396 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 SNTG1Q9NSN8 517 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 H2AFY2Q9P0M6 372 aaPredicted RBP14.8□□□□□ -0.04
TPM3-220ENST00000509601 NUFIP1Q9UHK0 495 aaKnown RBP14.8□□□□□ -0.04
TPM3-220ENST00000509601 SLC22A31A6NKX4 558 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 ZNF732B4DXR9 585 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 HOXA3O43365 443 aaPredicted RBP14.79□□□□□ -0.04
TPM3-220ENST00000509601 RHBDL1O75783 438 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 TTRP02766 147 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 TFF1P04155 84 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 SELLP14151 372 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 ATP6V1B1P15313 513 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 GPM6AP51674 278 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 CXCR4P61073 352 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 MFGE8Q08431 387 aaPredicted RBP14.79□□□□□ -0.04
TPM3-220ENST00000509601 RIPPLY1Q0D2K3 151 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 CEACAM21Q3KPI0 293 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 CEP78Q5JTW2 689 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 METTL11BQ5VVY1 283 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 C16orf87Q6PH81 154 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 KCTD8Q6ZWB6 473 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 SLC35F2Q8IXU6 374 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 OR5A2Q8NGI9 324 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 ANGPTL6Q8NI99 470 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 CIB1Q99828 191 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 PRRG3Q9BZD7 231 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 SEMA6AQ9H2E6 1030 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 MRM2Q9UI43 246 aaKnown RBP14.79□□□□□ -0.04
TPM3-220ENST00000509601 IKZF2Q9UKS7 526 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 PCDHGB1Q9Y5G3 927 aa14.79□□□□□ -0.04
TPM3-220ENST00000509601 NDUFB3O43676 98 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 GNG3P63215 75 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 PDCD1Q15116 288 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 DGUOKQ16854 277 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 CDONQ4KMG0 1287 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 MOB3CQ70IA8 216 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 FAM81AQ8TBF8 368 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 LHX4Q969G2 390 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 ZDHHC16Q969W1 377 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 FAM71F1Q96KD3 344 aaPredicted RBP14.78□□□□□ -0.04
TPM3-220ENST00000509601 DMRTB1Q96MA1 342 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 GAFA1Q96PS6 74 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 MNTQ99583 582 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 DCTN5Q9BTE1 182 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 DNTTIP1Q9H147 329 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 NOX4Q9NPH5 578 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 CLN6Q9NWW5 311 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 KPTNQ9Y664 436 aa14.78□□□□□ -0.04
TPM3-220ENST00000509601 IGHV1-69DA0A0B4J2H0 117 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 A0A1B0GTI1 187 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 GPR37O15354 613 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 IGHV1-69P01742 117 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 FCGR1AP12314 374 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 IKZF1Q13422 519 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 ZNF829Q3KNS6 432 aaPredicted RBP14.77□□□□□ -0.05
TPM3-220ENST00000509601 ZBTB37Q5TC79 503 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 PLEKHG7Q6ZR37 379 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 Q6ZSR3 168 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 SSX6Q7RTT6 188 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 ELMOD2Q8IZ81 293 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 C8orf46Q8TAG6 207 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 GATAD2BQ8WXI9 593 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 AQP3Q92482 292 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 CENPNQ96H22 339 aaPredicted RBP14.77□□□□□ -0.05
TPM3-220ENST00000509601 OSBPL10Q9BXB5 764 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 DNAJB11Q9UBS4 358 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 PIGLQ9Y2B2 252 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 R4GMQ9 66 aa14.77□□□□□ -0.05
TPM3-220ENST00000509601 MELTFP08582 738 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 ACAA1P09110 424 aaPredicted RBP14.76□□□□□ -0.05
TPM3-220ENST00000509601 FAHP16930 419 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 GLRA1P23415 457 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 EGR3Q06889 387 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 TMEM42Q69YG0 159 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 ASRGL1Q7L266 308 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 THAP5Q7Z6K1 395 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 Q8N7P7 452 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 OR14K1Q8NGZ2 314 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 MED30Q96HR3 178 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 ACOXLQ9NUZ1 547 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 NLKQ9UBE8 527 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 OR52A1Q9UKL2 312 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 OAZ3Q9UMX2 235 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 MAB21L2Q9Y586 359 aa14.76□□□□□ -0.05
TPM3-220ENST00000509601 V9GYS6 101 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms