RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ZNF823P16415 610 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 NDUFB7P17568 137 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 PAX6P26367 422 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 FAM3AP98173 230 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 SPIBQ01892 262 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 LIPEQ05469 1076 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 DCTN2Q13561 401 aaKnown RBP7.58□□□□□ -1.2
NEDD9-211ENST00000508546 TRIM25Q14258 630 aaKnown RBP7.58□□□□□ -1.2
NEDD9-211ENST00000508546 CASC10Q5T4H9 136 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 CBLL1Q75N03 491 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 SLC16A9Q7RTY1 509 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 CYP4Z1Q86W10 505 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 ZDHHC21Q8IVQ6 265 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 OR4K13Q8NH42 304 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 OR5K1Q8NHB7 308 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 KCNJ15Q99712 375 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 WDR13Q9H1Z4 485 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 MUC13Q9H3R2 512 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 HEXA-AS1Q9H8Q6 139 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 KRCC1Q9NPI7 259 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-211ENST00000508546 SNTG1Q9NSN8 517 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 TCF19Q9Y242 345 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 AP3M1Q9Y2T2 418 aa7.58□□□□□ -1.2
NEDD9-211ENST00000508546 hCG_38984A0A1B0GV85 526 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 A6NDX4 124 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 TMEM210A6NLX4 147 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 ARPC2O15144 300 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 IDH3BO43837 385 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 PEX14O75381 377 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 GLCEO94923 617 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 ZNF682O95780 498 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 ALDOBP05062 364 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 PF4V1P10720 104 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 SLC2A1P11166 492 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 ATP6V1B2P21281 511 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 POU1F1P28069 291 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 SLC6A6P31641 620 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 RPS27P42677 84 aaKnown RBP7.57□□□□□ -1.2
NEDD9-211ENST00000508546 PRKXP51817 358 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 LGALS4P56470 323 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 IL5RAQ01344 420 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 MS4A2Q01362 244 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 FAM76BQ5HYJ3 339 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 FGD3Q5JSP0 725 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 FKBP9P1Q75LS8 142 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 DHFR2Q86XF0 187 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 MKXQ8IYA7 352 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 CSNK2A3Q8NEV1 391 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 FANK1Q8TC84 345 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 PYDC1Q8WXC3 89 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 HSH2DQ96JZ2 352 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 LRGUKQ96M69 825 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 MICU1Q9BPX6 476 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 COPS4Q9BT78 406 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 OR52D1Q9H346 318 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 FN3KQ9H479 309 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 GMPR2Q9P2T1 348 aaKnown RBP7.57□□□□□ -1.2
NEDD9-211ENST00000508546 MAGEL2Q9UJ55 1249 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 PITPNC1Q9UKF7 332 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 LRP12Q9Y561 859 aa7.57□□□□□ -1.2
NEDD9-211ENST00000508546 TRBV4-1A0A0J9YWV2 114 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 A0A1W2PRX2 142 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 ANXA2P2A6NMY6 339 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 OR2AT4A6NND4 320 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 ZNF878C9JN71 531 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 CXCR6O00574 342 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 AKR7A2O43488 359 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 PF4P02776 101 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 TFF1P04155 84 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 NHLRC4P0CG21 123 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-211ENST00000508546 PSKH1P11801 424 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 RHCEP18577 417 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 CFL1P23528 166 aaKnown RBP7.56□□□□□ -1.2
NEDD9-211ENST00000508546 GNALP38405 381 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 VDAC2P45880 294 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-211ENST00000508546 GMFBP60983 142 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 SEC23BQ15437 767 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 TIGD6Q17RP2 521 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 KLHL12Q53G59 568 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 LCN8Q6JVE9 175 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 ZFP1Q6P2D0 407 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 CYP2R1Q6VVX0 501 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 DCXRQ7Z4W1 244 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 SPATA24Q86W54 205 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 FAM185AQ8N0U4 392 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 FTMTQ8N4E7 242 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 C11orf42Q8N5U0 333 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 SDR9C7Q8NEX9 313 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 OR5AU1Q8NGC0 362 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 RPS4Y2Q8TD47 263 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 SGK3Q96BR1 496 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 REEP6Q96HR9 211 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 DHRS1Q96LJ7 313 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 OR5M11Q96RB7 305 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 FUZQ9BT04 418 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 RTL8AQ9BWD3 113 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 PAPOLGQ9BWT3 736 aaKnown RBP7.56□□□□□ -1.2
NEDD9-211ENST00000508546 GPR61Q9BZJ8 451 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 PPP1R3EQ9H7J1 279 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 ELL3Q9HB65 397 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms