RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 PIGLQ9Y2B2 252 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 V9GYS6 101 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 RPSAP08865 295 aaKnown RBP16.56■□□□□ 0.24
SFXN1-209ENST00000508290 ACTA2P62736 377 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 ACTG2P63267 376 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 CSNK2BP67870 215 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 CLVS2Q5SYC1 327 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 LYPD2Q6UXB3 125 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 BPIFB2Q8N4F0 458 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 ZNF671Q8TAW3 534 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 C10orf35Q96D05 121 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 RNFT2Q96EX2 444 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 MBOAT4Q96T53 435 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 NUP50Q9UKX7 468 aa16.56■□□□□ 0.24
SFXN1-209ENST00000508290 FBN1P35555 2871 aaKnown RBP16.56■□□□□ 0.24
SFXN1-209ENST00000508290 LOC100130705A0A1B0GUX0 176 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 A0A1B0GVI7 797 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 TMPRSS2O15393 492 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 SLC16A6O15403 523 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 BAG2O95816 211 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 NRASP01111 189 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 UBCP0CG48 685 aaKnown RBP16.55■□□□□ 0.24
SFXN1-209ENST00000508290 ATPAF1Q5TC12 328 aaPredicted RBP16.55■□□□□ 0.24
SFXN1-209ENST00000508290 PLCXD3Q63HM9 321 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 TMEM42Q69YG0 159 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 SSX6Q7RTT6 188 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 CATSPERDQ86XM0 798 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 ACBD7Q8N6N7 88 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 PNLDC1Q8NA58 520 aaKnown RBP16.55■□□□□ 0.24
SFXN1-209ENST00000508290 SCCPDHQ8NBX0 429 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 C19orf18Q8NEA5 215 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 ZNF555Q8NEP9 628 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 UPRTQ96BW1 309 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 NUDT16L1Q9BRJ7 211 aaKnown RBP16.55■□□□□ 0.24
SFXN1-209ENST00000508290 ADI1Q9BV57 179 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 OR51I2Q9H344 312 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 PLEKHA1Q9HB21 404 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 SMPD3Q9NY59 655 aaPredicted RBP16.55■□□□□ 0.24
SFXN1-209ENST00000508290 DNAJB11Q9UBS4 358 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 SLC22A13Q9Y226 551 aa16.55■□□□□ 0.24
SFXN1-209ENST00000508290 A0A1B0GTI1 187 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 DAPL1A0PJW8 107 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 ZNF732B4DXR9 585 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 J3QRE1 110 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 RPP14O95059 124 aaKnown RBP16.54■□□□□ 0.24
SFXN1-209ENST00000508290 GYPAP02724 150 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 FAHP16930 419 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 GPM6AP51674 278 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 BPIFB3P59826 476 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 HILS1P60008 231 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 ISL1P61371 349 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 CDONQ4KMG0 1287 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 ZNF573Q86YE8 665 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 PACRGLQ8N7B6 248 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 OR14K1Q8NGZ2 314 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 RHOXF1Q8NHV9 184 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 HAVCR2Q8TDQ0 301 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 RORBQ92753 470 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 RPL3LQ92901 407 aaKnown RBP16.54■□□□□ 0.24
SFXN1-209ENST00000508290 UBE2FQ969M7 185 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 SLC29A1Q99808 456 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 PPP1R3EQ9H7J1 279 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 INPP5EQ9NRR6 644 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 FAM118AQ9NWS6 357 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 RASL12Q9NYN1 266 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 CTSZQ9UBR2 303 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 GNG8Q9UK08 70 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 EXOGQ9Y2C4 368 aaKnown RBP16.54■□□□□ 0.24
SFXN1-209ENST00000508290 POLDIP2Q9Y2S7 368 aa16.54■□□□□ 0.24
SFXN1-209ENST00000508290 CUBNO60494 3623 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 NKX6-3A6NJ46 265 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.53■□□□□ 0.24
SFXN1-209ENST00000508290 MAGEB4O15481 346 aaPredicted RBP16.53■□□□□ 0.24
SFXN1-209ENST00000508290 SYT7O43581 403 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 APOL3O95236 402 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 FADS2O95864 444 aaKnown RBP16.53■□□□□ 0.24
SFXN1-209ENST00000508290 EGR1P18146 543 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 GABRB1P18505 474 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 ZNF85Q03923 595 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 MRPL28Q13084 256 aaKnown RBP16.53■□□□□ 0.24
SFXN1-209ENST00000508290 KRTAP24-1Q3LI83 254 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 STUMQ69YW2 141 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 FDX2Q6P4F2 183 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 RBMS3Q6XE24 437 aaKnown RBP16.53■□□□□ 0.24
SFXN1-209ENST00000508290 MOB3CQ70IA8 216 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 ENTHD1Q8IYW4 607 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 MED30Q96HR3 178 aa16.53■□□□□ 0.24
SFXN1-209ENST00000508290 P2RY10O00398 339 aa16.52■□□□□ 0.24
SFXN1-209ENST00000508290 GATBO75879 557 aaKnown RBP16.52■□□□□ 0.24
SFXN1-209ENST00000508290 SERPINA3P01011 423 aa16.52■□□□□ 0.24
SFXN1-209ENST00000508290 RAB40BQ12829 278 aa16.52■□□□□ 0.24
SFXN1-209ENST00000508290 WDR38Q5JTN6 314 aa16.52■□□□□ 0.24
SFXN1-209ENST00000508290 CEP78Q5JTW2 689 aa16.52■□□□□ 0.24
SFXN1-209ENST00000508290 TMEM244Q5VVB8 128 aa16.52■□□□□ 0.24
SFXN1-209ENST00000508290 PHC2Q8IXK0 858 aa16.52■□□□□ 0.24
SFXN1-209ENST00000508290 PPP1R14AQ96A00 147 aa16.52■□□□□ 0.24
SFXN1-209ENST00000508290 ACOXLQ9NUZ1 547 aa16.52■□□□□ 0.24
SFXN1-209ENST00000508290 RPL36Q9Y3U8 105 aaKnown RBP16.52■□□□□ 0.24
SFXN1-209ENST00000508290 ANKRD61A6NGH8 418 aa16.51■□□□□ 0.23
SFXN1-209ENST00000508290 DVL1O14640 695 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms