RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 GUK1Q16774 197 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ANKRD55Q3KP44 614 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ABCA11PQ4W5N1 156 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 AWAT1Q58HT5 328 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 KRBOX4Q5JUW0 171 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM209BQ5JX69 171 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 C1QL3Q5VWW1 255 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 KIAA0895LQ68EN5 471 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ABHD12BQ7Z5M8 362 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 GKN2Q86XP6 184 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 UEVLDQ8IX04 471 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 LRRC18Q8N456 261 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM89BQ8N5H3 189 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF565Q8N9K5 539 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 CCDC71LQ8N9Z2 235 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SUMF2Q8NBJ7 301 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 NOXO1Q8NFA2 376 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR51T1Q8NGJ9 327 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR13G1Q8NGZ3 307 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 PATE1Q8WXA2 126 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 PP6455Q8WZ26 134 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 C11orf40Q8WZ69 217 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM230Q96A57 120 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ADAT3Q96EY9 351 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ABHD14BQ96IU4 210 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR10C1Q96KK4 312 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 MRGPRX1Q96LB2 322 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FOXN4Q96NZ1 517 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 TGM7Q96PF1 710 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SYT3Q9BQG1 590 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 GINS3Q9BRX5 216 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 ST6GALNAC5Q9BVH7 336 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 TM2D1Q9BX74 207 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SUCNR1Q9BXA5 334 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 PLA2G2FQ9BZM2 168 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 EIF5A2Q9GZV4 153 aaKnown RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 WWTR1Q9GZV5 400 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 RAB33BQ9H082 229 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 TOLLIPQ9H0E2 274 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FN3KRPQ9HA64 309 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 BCO1Q9HAY6 547 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SPACA1Q9HBV2 294 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SIRT7Q9NRC8 400 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 SDHAF3Q9NRP4 125 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 LANCL2Q9NS86 450 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 C19orf12Q9NSK7 152 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 KLHL13Q9P2N7 655 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 FBXL17Q9UF56 701 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 PADI1Q9ULC6 663 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMED3Q9Y3Q3 217 aa4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 GOLGB1Q14789 3259 aaKnown RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 GOLGA4Q13439 2230 aaKnown RBP4.38□□□□□ -1.71
HMGB3P16-201ENST00000508037 A0A087WWC5 75 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 TRAV20A0A0B4J274 112 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 WIPF3A6NGB9 483 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 LIPT2A6NK58 231 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 LINC00587B1AMM8 73 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 B4DGG1 531 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 MS4A18H0YCH9 400 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 AGPAT2O15120 278 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 SOCS1O15524 211 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 HSPA12AO43301 675 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF354AO60765 605 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 MPZL1O95297 269 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR2C1O95371 312 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 KNG1P01042 644 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 IGHV2-5P01817 119 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 HBE1P02100 147 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 GLAP06280 429 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR8U9P0C7N5 309 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 THEGLP0DJG4 465 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF728P0DKX0 622 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 FOSL1P15407 271 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 DTYMKP23919 212 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 DUSP1P28562 367 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 BLVRBP30043 206 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR1D4P47884 311 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 SULT1A1P50225 295 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF41P51814 821 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 BIDP55957 195 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM33P57088 247 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 PPP1CAP62136 330 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 SUPT4H1P63272 117 aaKnown RBP4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 GABREP78334 506 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF616Q08AN1 781 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 SQSTM1Q13501 440 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 FZD2Q14332 565 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF266Q14584 549 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 MS4A18Q3C1V0 323 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC22A6Q4U2R8 563 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 MIDNQ504T8 468 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 AKIRIN2Q53H80 203 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 PLAC9Q5JTB6 97 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 SOHLH1Q5JUK2 328 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM240Q5SV17 173 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 AADACL3Q5VUY0 350 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 RPUSD3Q6P087 351 aaKnown RBP4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 DPPA3Q6W0C5 159 aa4.37□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMPPEQ6ZT21 453 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms