RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 DOK3Q7L591 496 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 SPRED2Q7Z698 418 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 WDFY1Q8IWB7 410 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 FOXRED2Q8IWF2 684 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 SULF2Q8IWU5 870 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 ZNF441Q8N8Z8 693 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 LRTM2Q8N967 370 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 OR13H1Q8NG92 308 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 FGF14Q92915 247 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 PECRQ9BY49 303 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 WWTR1Q9GZV5 400 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 UNKLQ9H9P5 680 aaKnown RBP15.63■□□□□ 0.09
NUP54-205ENST00000507257 SLC2A4RGQ9NR83 387 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 A0A087WWC5 75 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 A0A1W2PNV4 684 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 A0A1W2PPE2 198 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 CELA2BP08218 269 aaPredicted RBP15.62■□□□□ 0.09
NUP54-205ENST00000507257 HCKP08631 526 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 DAOP14920 347 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 IL11P20809 199 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 OR2B8PP59922 312 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 POU3F1Q03052 451 aaPredicted RBP15.62■□□□□ 0.09
NUP54-205ENST00000507257 THEM4Q5T1C6 240 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 METTL27Q8N6F8 245 aaPredicted RBP15.62■□□□□ 0.09
NUP54-205ENST00000507257 OR8B12Q8NGG6 310 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 OR51T1Q8NGJ9 327 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 HPSE2Q8WWQ2 592 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 MUCL1Q96DR8 90 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 SHDQ96IW2 340 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 MRGPRX1Q96LB2 322 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 MRPL13Q9BYD1 178 aaKnown RBP15.62■□□□□ 0.09
NUP54-205ENST00000507257 NRSN2Q9GZP1 204 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 CHST5Q9GZS9 411 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 PARPBPQ9NWS1 579 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 KLF8O95600 359 aaPredicted RBP15.62■□□□□ 0.09
NUP54-205ENST00000507257 ARG1P05089 322 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 HPNP05981 417 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 APOBEC1P41238 236 aaKnown RBP15.62■□□□□ 0.09
NUP54-205ENST00000507257 CAPZBP47756 277 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 ACY1Q03154 408 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 SLC16A14Q7RTX9 510 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 PHOSPHO2Q8TCD6 241 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 DAZLQ92904 295 aaKnown RBP15.62■□□□□ 0.09
NUP54-205ENST00000507257 GALNT14Q96FL9 552 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 SPACA5Q96QH8 159 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 LSM5Q9Y4Y9 91 aaKnown RBP15.62■□□□□ 0.09
NUP54-205ENST00000507257 LHFPL6Q9Y693 200 aa15.62■□□□□ 0.09
NUP54-205ENST00000507257 TRBV23-1A0A0A0MS06 115 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 A0A1W2PP11 408 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 OR2C1O95371 312 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 KNG1P01042 644 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 SUMO3P55854 103 aaPredicted RBP15.61■□□□□ 0.09
NUP54-205ENST00000507257 TLE3Q04726 772 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 IL13RA2Q14627 380 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.61■□□□□ 0.09
NUP54-205ENST00000507257 ABHD12BQ7Z5M8 362 aaPredicted RBP15.61■□□□□ 0.09
NUP54-205ENST00000507257 SEMA6DQ8NFY4 1073 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 MRPL24Q96A35 216 aaKnown RBP15.61■□□□□ 0.09
NUP54-205ENST00000507257 C20orf24Q9BUV8 137 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 SMIM3Q9BZL3 60 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 UCK1Q9HA47 277 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 GPR84Q9NQS5 396 aa15.61■□□□□ 0.09
NUP54-205ENST00000507257 BTBD17A6NE02 478 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 ANKUB1A6NFN9 424 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 K7N7A8 449 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 MBPP02686 304 aaPredicted RBP15.6■□□□□ 0.09
NUP54-205ENST00000507257 KIAA0141Q14154 515 aaPredicted RBP15.6■□□□□ 0.09
NUP54-205ENST00000507257 COL19A1Q14993 1142 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 HIKESHIQ53FT3 197 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 PYY3Q5JQD4 70 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.6■□□□□ 0.09
NUP54-205ENST00000507257 TMEM156Q8N614 296 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 TSLPQ969D9 159 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 MVB12AQ96EY5 273 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 GPER1Q99527 375 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 CDC14CA4D256 554 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 H7C1Q1 480 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 BLVRBP30043 206 aaPredicted RBP15.6■□□□□ 0.09
NUP54-205ENST00000507257 SOHLH1Q5JUK2 328 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 NCMAPQ5T1S8 102 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 STT3BQ8TCJ2 826 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 PFDN5Q99471 154 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 WFDC1Q9HC57 220 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 GPR27Q9NS67 375 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 MED29Q9NX70 200 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 ALKBH4Q9NXW9 302 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 GAR1Q9NY12 217 aaKnown RBP15.6■□□□□ 0.09
NUP54-205ENST00000507257 KCNIP3Q9Y2W7 256 aa15.6■□□□□ 0.09
NUP54-205ENST00000507257 IGKV1-9A0A0C4DH69 117 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 SPTY2D1-AS1A0A0U1RR47 76 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 CXorf65A6NEN9 183 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 BCAT2O15382 392 aaPredicted RBP15.59■□□□□ 0.09
NUP54-205ENST00000507257 IGLV3-1P01715 115 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 ITGA3P26006 1051 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 S100A2P29034 98 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 GPX4P36969 197 aaPredicted RBP15.59■□□□□ 0.09
NUP54-205ENST00000507257 ZNF121P58317 390 aaPredicted RBP15.59■□□□□ 0.09
NUP54-205ENST00000507257 KCNMB1Q16558 191 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 CRIP3Q6Q6R5 217 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms