RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 SNCBQ16143 134 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 NSUN5P1Q3KNT7 163 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 DEFB121Q5J5C9 76 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 GPR139Q6DWJ6 353 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 C11orf87Q6NUJ2 197 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 C1orf94Q6P1W5 598 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 WDR93Q6P2C0 686 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 COLCA1Q6ZS62 124 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 ADCK1Q86TW2 530 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 RNF113BQ8IZP6 322 aaKnown RBP5.44□□□□□ -1.54
NR1I3-224ENST00000507215 Q8N2B8 174 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 BHLHE23Q8NDY6 225 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 MOSPD2Q8NHP6 518 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 C8orf46Q8TAG6 207 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 ST8SIA4Q92187 359 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 BPIFA2Q96DR5 249 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 SSX3Q99909 188 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 MMP28Q9H239 520 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 RNPEPL1Q9HAU8 725 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 NRIP3Q9NQ35 241 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 RIMS3Q9UJD0 308 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 PITPNC1Q9UKF7 332 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 POLR1DQ9Y2S0 133 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 TNFRSF18Q9Y5U5 241 aa5.44□□□□□ -1.54
NR1I3-224ENST00000507215 STAB2Q8WWQ8 2551 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 LOC100653049A0A140TA62 436 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 hCG_1809904A0A1W2PP81 198 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 A0A1W2PPE2 198 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 A0A1W2PR64 198 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 A0A1W2PRV1 198 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 PRSS37A4D1T9 235 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 KRT34O76011 436 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 LHBP01229 141 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 OPN1SWP03999 348 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 HLA-DPB1P04440 258 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 CD14P08571 375 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 ZNF26P17031 533 aaPredicted RBP5.43□□□□□ -1.54
NR1I3-224ENST00000507215 CRABP1P29762 137 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 RBMXP38159 391 aaKnown RBP5.43□□□□□ -1.54
NR1I3-224ENST00000507215 DDOSTP39656 456 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 GSK3BP49841 420 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 ERFP50548 548 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 SLC18A1P54219 525 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 EGFEM1PQ0D2K5 195 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 GK2Q14410 553 aaPredicted RBP5.43□□□□□ -1.54
NR1I3-224ENST00000507215 FAM201AQ5SY85 155 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 CCDC80Q76M96 950 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 MRPL21Q7Z2W9 205 aaKnown RBP5.43□□□□□ -1.54
NR1I3-224ENST00000507215 PIGWQ7Z7B1 504 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 OAFQ86UD1 273 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 MSRB3Q8IXL7 192 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 C17orf53Q8N3J3 647 aaPredicted RBP5.43□□□□□ -1.54
NR1I3-224ENST00000507215 GPR32P1Q8NGA4 272 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 OR4C15Q8NGM1 316 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 OR9I1Q8NGQ6 314 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 PFN4Q8NHR9 129 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 TMEM255BQ8WV15 326 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 MED30Q96HR3 178 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 SH3GL1Q99961 368 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 WFDC6Q9BQY6 131 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 DCTN5Q9BTE1 182 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 ADAT1Q9BUB4 502 aaKnown RBP5.43□□□□□ -1.54
NR1I3-224ENST00000507215 MCRIP2Q9BUT9 160 aaKnown RBP5.43□□□□□ -1.54
NR1I3-224ENST00000507215 C20orf141Q9NUB4 165 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 UFSP2Q9NUQ7 469 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 FOXJ3Q9UPW0 622 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 LRP12Q9Y561 859 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 U3KQK5 164 aa5.43□□□□□ -1.54
NR1I3-224ENST00000507215 hCG_1807616A0A1W2PRN6 198 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 NKX6-3A6NJ46 265 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 A6NLC8 198 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 CD300LBA8K4G0 201 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 VGLL3A8MV65 326 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 GYPAP02724 150 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 IFI30P13284 250 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 SLC6A1P30531 599 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 RPL4P36578 427 aaKnown RBP5.42□□□□□ -1.54
NR1I3-224ENST00000507215 HIST1H3AP68431 136 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 HNRNPA0Q13151 305 aaKnown RBP5.42□□□□□ -1.54
NR1I3-224ENST00000507215 MPPED2Q15777 294 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 KRTAP27-1Q3LI81 207 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 KRT71Q3SY84 523 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 SLC36A3Q495N2 470 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 CCDC92Q53HC0 331 aaPredicted RBP5.42□□□□□ -1.54
NR1I3-224ENST00000507215 ATPAF1Q5TC12 328 aaPredicted RBP5.42□□□□□ -1.54
NR1I3-224ENST00000507215 HIST2H3PS2Q5TEC6 136 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 PRAMEF6Q5VXH4 476 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 HIST2H3AQ71DI3 136 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 CPLX4Q7Z7G2 160 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 NKAIN4Q8IVV8 208 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 PDZD9Q8IXQ8 264 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 FTMTQ8N4E7 242 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 GCSAMQ8N6F7 178 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 LRRC75AQ8NAA5 344 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 CYB561A3Q8NBI2 242 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 LZICQ8WZA0 190 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 TNFRSF14Q92956 283 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 RPL36ALQ969Q0 106 aaKnown RBP5.42□□□□□ -1.54
NR1I3-224ENST00000507215 SPTSSAQ969W0 71 aa5.42□□□□□ -1.54
NR1I3-224ENST00000507215 TAMM41Q96BW9 452 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms