RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 PRDX4Q13162 271 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 MED21Q13503 144 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 CDK5R1Q15078 307 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 UBE2V2Q15819 145 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 CARTPTQ16568 116 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 ZNF181Q2M3W8 571 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 CEACAM21Q3KPI0 293 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 CLVS2Q5SYC1 327 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 ZBTB37Q5TC79 503 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 PRAMEF6Q5VXH4 476 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 DMKNQ6E0U4 476 aaPredicted RBP4.81□□□□□ -1.64
USP46-206ENST00000506707 MOB3CQ70IA8 216 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 PRSS48Q7RTY5 328 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 MOGAT3Q86VF5 341 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 COMMD2Q86X83 199 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 FTMTQ8N4E7 242 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 MAPK1IP1LQ8NDC0 245 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 CCDC54Q8NEL0 328 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 OR1M1Q8NGA1 313 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 OR5A2Q8NGI9 324 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 OR5AK2Q8NH90 309 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 ZNF420Q8TAQ5 688 aaPredicted RBP4.81□□□□□ -1.64
USP46-206ENST00000506707 Q8TCH9 128 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 HAVCR2Q8TDQ0 301 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 HPSE2Q8WWQ2 592 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 RGP1Q92546 391 aaPredicted RBP4.81□□□□□ -1.64
USP46-206ENST00000506707 GHSRQ92847 366 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 ERGIC1Q969X5 290 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 FGGYQ96C11 551 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 C10orf35Q96D05 121 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 ADAT3Q96EY9 351 aaPredicted RBP4.81□□□□□ -1.64
USP46-206ENST00000506707 OR5M11Q96RB7 305 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 PDCD1LG2Q9BQ51 273 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 PIMREGQ9BSJ6 248 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 ADAT1Q9BUB4 502 aaKnown RBP4.81□□□□□ -1.64
USP46-206ENST00000506707 PAPOLGQ9BWT3 736 aaKnown RBP4.81□□□□□ -1.64
USP46-206ENST00000506707 YTHDF1Q9BYJ9 559 aaKnown RBP4.81□□□□□ -1.64
USP46-206ENST00000506707 Q9H521 79 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 TMEM106BQ9NUM4 274 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 UFSP2Q9NUQ7 469 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 ENPP5Q9UJA9 477 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 PPP1R3CQ9UQK1 317 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 ERGIC3Q9Y282 383 aa4.81□□□□□ -1.64
USP46-206ENST00000506707 LSM2Q9Y333 95 aaKnown RBP4.81□□□□□ -1.64
USP46-206ENST00000506707 NOP16Q9Y3C1 178 aaKnown RBP4.81□□□□□ -1.64
USP46-206ENST00000506707 ARID1AO14497 2285 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 HIVEP1P15822 2718 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 CREBBPQ92793 2442 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 IGKV1-9A0A0C4DH69 117 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.8□□□□□ -1.64
USP46-206ENST00000506707 LOC107986453A0A1B0GWG9 222 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 PQLC2LA1A4F0 135 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 LRP5LA4QPB2 252 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 ANXA2P2A6NMY6 339 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 CLDN25C9JDP6 229 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 IFNL4K9M1U5 179 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 PPIHO43447 177 aaKnown RBP4.8□□□□□ -1.64
USP46-206ENST00000506707 RGS10O43665 173 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 FSTL3O95633 263 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 CYB5R3P00387 301 aaPredicted RBP4.8□□□□□ -1.64
USP46-206ENST00000506707 MT-ND2P03891 347 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 CD1AP06126 327 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 RPSAP08865 295 aaKnown RBP4.8□□□□□ -1.64
USP46-206ENST00000506707 FOSL1P15407 271 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 ZNF12P17014 697 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 USF1P22415 310 aaPredicted RBP4.8□□□□□ -1.64
USP46-206ENST00000506707 GPR6P46095 362 aaPredicted RBP4.8□□□□□ -1.64
USP46-206ENST00000506707 GPM6AP51674 278 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 CDH15P55291 814 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 LMO4P61968 165 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 RPS11P62280 158 aaKnown RBP eCLIP4.8□□□□□ -1.64
USP46-206ENST00000506707 HOXA4Q00056 320 aaPredicted RBP4.8□□□□□ -1.64
USP46-206ENST00000506707 BDH1Q02338 343 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 SLC3A1Q07837 685 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 SPHARQ15513 63 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 CEP78Q5JTW2 689 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 FAM201AQ5SY85 155 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 ZNF826PQ6ZT77 177 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 LRRC28Q86X40 367 aaPredicted RBP4.8□□□□□ -1.64
USP46-206ENST00000506707 ZDHHC23Q8IYP9 409 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 PARP16Q8N5Y8 322 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 ZNF676Q8N7Q3 588 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 ZFP41Q8N8Y5 198 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 SCCPDHQ8NBX0 429 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 OR8S1Q8NH09 359 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 SMIM19Q96E16 107 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 RNF170Q96K19 258 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 C18orf12Q96KH6 178 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 COX4I2Q96KJ9 171 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 PGLYRP3Q96LB9 341 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 HIST1H2AAQ96QV6 131 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 SMR3AQ99954 134 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 MICU1Q9BPX6 476 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 TLNRD1Q9H1K6 362 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 OR51I2Q9H344 312 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 METTL17Q9H7H0 456 aaPredicted RBP4.8□□□□□ -1.64
USP46-206ENST00000506707 FN3KRPQ9HA64 309 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 ABCB9Q9NP78 766 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 TRIM36Q9NQ86 728 aa4.8□□□□□ -1.64
USP46-206ENST00000506707 GPR173Q9NS66 373 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms