RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 LRRC29Q8WV35 223 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 ZFAND2BQ8WV99 257 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 OR5P3Q8WZ94 311 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 ITFG2Q969R8 447 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 C4orf36Q96KX1 117 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 MYCBPQ99417 103 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-209ENST00000506630 TMEM246Q9BRR3 403 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 FGF23Q9GZV9 251 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-209ENST00000506630 METTL17Q9H7H0 456 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-209ENST00000506630 PLEKHA1Q9HB21 404 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 MIOXQ9UGB7 285 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 V9GYS6 101 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 ANK2Q01484 3957 aa10.97□□□□□ -0.65
TCOF1-209ENST00000506630 A0A0A6YYJ9 748 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 A0A0G2JMP0 313 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 A0A0X1KG70 313 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 A0A1B0GTI1 187 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 LOC107986453A0A1B0GWG9 222 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 OOEPA6NGQ2 149 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 A6NIN4 97 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 LGALS8O00214 317 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 CDIPTO14735 213 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 SYT7O43581 403 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 NRASP01111 189 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 IGHA1P01876 353 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 UBCP0CG48 685 aaKnown RBP10.96□□□□□ -0.65
TCOF1-209ENST00000506630 EGR1P18146 543 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 CCL1P22362 96 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 CAPGP40121 348 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 KIR3DL2P43630 455 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 GPM6AP51674 278 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 ADARB1P78563 741 aaKnown RBP10.96□□□□□ -0.65
TCOF1-209ENST00000506630 IL18R1Q13478 541 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 GALEQ14376 348 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 KCNJ8Q15842 424 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 KLHL22Q53GT1 634 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 DCAF12L2Q5VW00 463 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 FAHD2BQ6P2I3 314 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-209ENST00000506630 KCTD20Q7Z5Y7 419 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 C11orf53Q8IXP5 236 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 C3orf56Q8N813 242 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 OR4M2Q8NGB6 313 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 OR8B3Q8NGG8 313 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 RPL3LQ92901 407 aaKnown RBP10.96□□□□□ -0.65
TCOF1-209ENST00000506630 NEIL1Q96FI4 390 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-209ENST00000506630 FAHD2AQ96GK7 314 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 OR8B2Q96RD0 313 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 RNPEPL1Q9HAU8 725 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 TRIM36Q9NQ86 728 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 INPP5EQ9NRR6 644 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 GPR173Q9NS66 373 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 ERVK13-1Q9NX77 482 aa10.96□□□□□ -0.65
TCOF1-209ENST00000506630 TRAV38-1A0A0B4J264 116 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 ZNF732B4DXR9 585 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 H0YAE9 185 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 FSTL3O95633 263 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 ZFP36P26651 326 aaKnown RBP10.95□□□□□ -0.66
TCOF1-209ENST00000506630 GMFBP60983 142 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 GNB2P62879 340 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 GNG3P63215 75 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 ACTG1P63261 375 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 CEACAM21Q3KPI0 293 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 CLVS2Q5SYC1 327 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 LYPD2Q6UXB3 125 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 WDR82Q6UXN9 313 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 DCDC5Q6ZRR9 648 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 NLRC3Q7RTR2 1065 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 C8orf59Q8N0T1 100 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-209ENST00000506630 SCCPDHQ8NBX0 429 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 OR2G2Q8NGZ5 317 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 PELI1Q96FA3 418 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 SSBP3Q9BWW4 388 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-209ENST00000506630 TLNRD1Q9H1K6 362 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 OR5V1Q9UGF6 321 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 LRCH1Q9Y2L9 728 aa10.95□□□□□ -0.66
TCOF1-209ENST00000506630 IGHV3OR15-7A0A075B7D8 119 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 IRGMA1A4Y4 181 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 OR5B21A6NL26 309 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 DHRS7CA6NNS2 312 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 A8MXK9 166 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 LHBP01229 141 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 GYPAP02724 150 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 GNAO1P09471 354 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 WNT2P09544 360 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 ZNF12P17014 697 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 PITPNBP48739 271 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 NANOS3P60323 173 aaKnown RBP10.94□□□□□ -0.66
TCOF1-209ENST00000506630 SCGB2A2Q13296 93 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 KRT74Q7RTS7 529 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 RDH10Q8IZV5 341 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 SYS1Q8N2H4 156 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 OR5A2Q8NGI9 324 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-209ENST00000506630 ISG20L2Q9H9L3 353 aaKnown RBP10.94□□□□□ -0.66
TCOF1-209ENST00000506630 FGF20Q9NP95 211 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-209ENST00000506630 MRPS18AQ9NVS2 196 aaKnown RBP10.94□□□□□ -0.66
TCOF1-209ENST00000506630 DNAJB11Q9UBS4 358 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 HSPE1-MOB4S4R3N1 261 aa10.94□□□□□ -0.66
TCOF1-209ENST00000506630 ANKRD61A6NGH8 418 aa10.93□□□□□ -0.66
TCOF1-209ENST00000506630 SRRM5B3KS81 715 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms