RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 RPS6KA6Q9UK32 745 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SAMD4AQ9UPU9 718 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ARL2BPQ9Y2Y0 163 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 GMEB1Q9Y692 573 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 A0A1W2PRG6 482 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF726A6NNF4 738 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 H0YAE9 185 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 FXYD1O00168 92 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 LGALS9O00182 355 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 CXCR6O00574 342 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 RNF13O43567 381 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 NDUFB3O43676 98 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SNX3O60493 162 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 OR5F1O95221 314 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SLC2A10O95528 541 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 HIST1H2ABP04908 130 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SCG5P05408 212 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 COX5BP10606 129 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 MUC1P15941 1255 aaPredicted RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 CCL3L1P16619 93 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ANOS1P23352 680 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 PSMB8P28062 276 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 RBM34P42696 430 aaKnown RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 GSK3BP49841 420 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 DAP3P51398 398 aaKnown RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SLURP1P55000 103 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 LGALS4P56470 323 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TCTAP57738 103 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 KRTAP10-2P60368 255 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 HOXC5Q00444 222 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 GABPB1Q06547 395 aaPredicted RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 CD47Q08722 323 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF616Q08AN1 781 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ST3GAL3Q11203 375 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TRIM25Q14258 630 aaKnown RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 MELKQ14680 651 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 OR1Q1Q15612 314 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 IFI44LQ53G44 452 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 CYBRD1Q53TN4 286 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 FGD3Q5JSP0 725 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ENTPD8Q5MY95 495 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SAMD4BQ5PRF9 694 aaKnown RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 FAM27BQ5VT28 67 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 GPR139Q6DWJ6 353 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 CGB2Q6NT52 195 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TEX38Q6PEX7 206 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TTC33Q6PID6 262 aaPredicted RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 DLEU7Q6UYE1 221 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 HACD2Q6Y1H2 254 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF782Q6ZMW2 699 aaPredicted RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 FOXL2NBQ6ZUU3 175 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 FKBP9P1Q75LS8 142 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 HIST3H2AQ7L7L0 130 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 RRM2BQ7LG56 351 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SLC36A1Q7Z2H8 476 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ZBTB46Q86UZ6 589 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 OFCC1Q8IZS5 231 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 PGAM4Q8N0Y7 254 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 LSMEM1Q8N8F7 131 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 PLPP7Q8NBV4 271 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 CCDC197Q8NCU1 140 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 NOXO1Q8NFA2 376 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 OR1N2Q8NGR9 330 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 OR5J2Q8NH18 312 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 FANK1Q8TC84 345 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 HIST1H2ACQ93077 130 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF566Q969W8 418 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TAMM41Q96BW9 452 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SLC25A44Q96H78 314 aaPredicted RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 HSH2DQ96JZ2 352 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 LRGUKQ96M69 825 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 NSMCE2Q96MF7 247 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF582Q96NG8 517 aaPredicted RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 HOPXQ9BPY8 73 aaPredicted RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ELAC2Q9BQ52 826 aaKnown RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 WFDC6Q9BQY6 131 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TMEM43Q9BTV4 400 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 WFDC10AQ9H1F0 79 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TUBA4BQ9H853 241 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 HEXA-AS1Q9H8Q6 139 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 EFCAB1Q9HAE3 211 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 PLEKHA3Q9HB20 300 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TMEM100Q9NV29 134 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 C1orf123Q9NWV4 160 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 MRPL39Q9NYK5 338 aaKnown RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 PTTG3PQ9NZH4 202 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SLAMF8Q9P0V8 285 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SLC25A10Q9UBX3 287 aaPredicted RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TAGLN3Q9UI15 199 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF229Q9UJW7 825 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SLC7A7Q9UM01 511 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 TMEM5Q9Y2B1 443 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 POLR1DQ9Y2S0 133 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SH3GLB1Q9Y371 365 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 MED31Q9Y3C7 131 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 FBXO7Q9Y3I1 522 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 FAM32AQ9Y421 112 aaKnown RBP2.51□□□□□ -2.01
TCOF1-208ENST00000506063 HILPDAQ9Y5L2 63 aa2.51□□□□□ -2.01
TCOF1-208ENST00000506063 SNX13Q9Y5W8 968 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms