RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 FAM201AQ5SY85 155 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 FAM120AOSQ5T036 256 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 DCDC5Q6ZRR9 648 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 ZNF826PQ6ZT77 177 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 MOB3CQ70IA8 216 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 OR10Z1Q8NGY1 313 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 HPSE2Q8WWQ2 592 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 RNF166Q96A37 237 aaPredicted RBP17.32■□□□□ 0.36
DDR1-255ENST00000504927 PELI1Q96FA3 418 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 ZNF649Q9BS31 505 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 LPAR2Q9HBW0 351 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 FRRS1LQ9P0K9 344 aa17.32■□□□□ 0.36
DDR1-255ENST00000504927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■■■□□ 17.9
DDR1-255ENST00000504927 PPIAL4CA0A0B4J2A2 164 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 GNAO1P09471 354 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 GPM6AP51674 278 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 CR1LQ2VPA4 569 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 ESCO2Q56NI9 601 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 CEP78Q5JTW2 689 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 PLCXD3Q63HM9 321 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 WDR82Q6UXN9 313 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 ZNF771Q7L3S4 317 aaPredicted RBP17.31■□□□□ 0.36
DDR1-255ENST00000504927 NLRC3Q7RTR2 1065 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 GCSAMQ8N6F7 178 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 BOLLQ8N9W6 283 aaKnown RBP17.31■□□□□ 0.36
DDR1-255ENST00000504927 NRG4Q8WWG1 115 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 PLEKHA1Q9HB21 404 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 LRCH1Q9Y2L9 728 aa17.31■□□□□ 0.36
DDR1-255ENST00000504927 POLR3KQ9Y2Y1 108 aaPredicted RBP17.31■□□□□ 0.36
DDR1-255ENST00000504927 MALRD1Q5VYJ5 2156 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 OOEPA6NGQ2 149 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 ZNF732B4DXR9 585 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 SERPINA3P01011 423 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 RPS2P15880 293 aaKnown RBP17.3■□□□□ 0.36
DDR1-255ENST00000504927 MUC1P15941 1255 aaPredicted RBP17.3■□□□□ 0.36
DDR1-255ENST00000504927 KIR3DL2P43630 455 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 GBX2P52951 348 aaPredicted RBP17.3■□□□□ 0.36
DDR1-255ENST00000504927 MED21Q13503 144 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 RIPK1Q13546 671 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 ALKBH1Q13686 389 aaKnown RBP17.3■□□□□ 0.36
DDR1-255ENST00000504927 SFRP4Q6FHJ7 346 aaPredicted RBP17.3■□□□□ 0.36
DDR1-255ENST00000504927 TMPRSS11AQ6ZMR5 421 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 SCCPDHQ8NBX0 429 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 DEFB108BQ8NET1 73 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 ZNF671Q8TAW3 534 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 FBLIM1Q8WUP2 373 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 LRRC29Q8WV35 223 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 NEIL1Q96FI4 390 aaPredicted RBP17.3■□□□□ 0.36
DDR1-255ENST00000504927 TMEM80Q96HE8 168 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 TECTBQ96PL2 329 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 OR51I2Q9H344 312 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 ISG20L2Q9H9L3 353 aaKnown RBP17.3■□□□□ 0.36
DDR1-255ENST00000504927 CHCHD3Q9NX63 227 aaKnown RBP17.3■□□□□ 0.36
DDR1-255ENST00000504927 DIMT1Q9UNQ2 313 aaKnown RBP17.3■□□□□ 0.36
DDR1-255ENST00000504927 CUBNO60494 3623 aa17.3■□□□□ 0.36
DDR1-255ENST00000504927 A0A0G2JMP0 313 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 A0A0X1KG70 313 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 EFCAB10A6NFE3 127 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 LIMS3P0CW19 117 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 LIMS4P0CW20 117 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 MYL12AP19105 171 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 NANOS3P60323 173 aaKnown RBP17.29■□□□□ 0.36
DDR1-255ENST00000504927 CSNK2BP67870 215 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 MICBQ29980 383 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 TEX36Q5VZQ5 186 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 FAHD2BQ6P2I3 314 aaPredicted RBP17.29■□□□□ 0.36
DDR1-255ENST00000504927 RDH10Q8IZV5 341 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 TEX29Q8N6K0 151 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 OR4M2Q8NGB6 313 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 OR8B3Q8NGG8 313 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 RPL3LQ92901 407 aaKnown RBP17.29■□□□□ 0.36
DDR1-255ENST00000504927 FAHD2AQ96GK7 314 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 OR8B2Q96RD0 313 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 FGF23Q9GZV9 251 aaPredicted RBP17.29■□□□□ 0.36
DDR1-255ENST00000504927 METTL17Q9H7H0 456 aaPredicted RBP17.29■□□□□ 0.36
DDR1-255ENST00000504927 PLCXD1Q9NUJ7 323 aa17.29■□□□□ 0.36
DDR1-255ENST00000504927 CNOT2Q9NZN8 540 aaKnown RBP17.29■□□□□ 0.36
DDR1-255ENST00000504927 CAB39Q9Y376 341 aaPredicted RBP17.29■□□□□ 0.36
DDR1-255ENST00000504927 EXOSC1Q9Y3B2 195 aaKnown RBP17.29■□□□□ 0.36
DDR1-255ENST00000504927 LOC107986453A0A1B0GWG9 222 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 A8MXK9 166 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 C3orf80F5H4A9 247 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 J3QLI3 93 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 GATBO75879 557 aaKnown RBP17.28■□□□□ 0.36
DDR1-255ENST00000504927 PIPP12273 146 aaPredicted RBP17.28■□□□□ 0.36
DDR1-255ENST00000504927 ZFP36P26651 326 aaKnown RBP17.28■□□□□ 0.36
DDR1-255ENST00000504927 TGM4P49221 684 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 LCN2P80188 198 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 ZNF573Q86YE8 665 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 PP6455Q8WZ26 134 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 GGHQ92820 318 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 C12orf43Q96C57 262 aaKnown RBP17.28■□□□□ 0.36
DDR1-255ENST00000504927 SSBP3Q9BWW4 388 aaPredicted RBP17.28■□□□□ 0.36
DDR1-255ENST00000504927 HHLA2Q9UM44 414 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 SLC7A11Q9UPY5 501 aa17.28■□□□□ 0.36
DDR1-255ENST00000504927 ANKRD61A6NGH8 418 aa17.27■□□□□ 0.36
DDR1-255ENST00000504927 A6NIN4 97 aa17.27■□□□□ 0.36
DDR1-255ENST00000504927 OR4C45A6NMZ5 311 aa17.27■□□□□ 0.36
DDR1-255ENST00000504927 SRRM5B3KS81 715 aa17.27■□□□□ 0.36
DDR1-255ENST00000504927 TNFRSF13BO14836 293 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms