RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	GABRA5	P31644	462 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	PTH2R	P49190	550 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZP1	P60852	638 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ERVK11-1	P61568	191 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CCL8	P80075	99 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	MRPS11	P82912	194 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	SLC3A1	Q07837	685 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	RIPPLY1	Q0D2K3	151 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	PRDX4	Q13162	271 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	TST	Q16762	297 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZNF181	Q2M3W8	571 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	DEFB113	Q30KQ7	82 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	GFOD2	Q3B7J2	385 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CEACAM21	Q3KPI0	293 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZMAT1	Q5H9K5	638 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	WDR82	Q6UXN9	313 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ASCL4	Q6XD76	172 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	LRRTM1	Q86UE6	522 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	GCSAM	Q8N6F7	178 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CSNK2A3	Q8NEV1	391 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788		Q8NFD4	153 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR13G1	Q8NGZ3	307 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788		Q8TCH9	128 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	GPR148	Q8TDV2	347 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ITLN1	Q8WWA0	313 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	FCGR1B	Q92637	280 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	RPL3L	Q92901	407 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	FGGY	Q96C11	551 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	MRPL48	Q96GC5	212 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	MEGF10	Q96KG7	1140 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR2V2	Q96R30	315 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CCL19	Q99731	98 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CCDC90B	Q9GZT6	254 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR51I2	Q9H344	312 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	TPK1	Q9H3S4	243 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZCCHC4	Q9H5U6	513 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CYSLTR2	Q9NS75	346 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	FAIM	Q9NVQ4	179 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZDHHC8	Q9ULC8	765 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	PIGL	Q9Y2B2	252 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	MPC1	Q9Y5U8	109 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	IGKV1-12	A0A0C4DH73	117 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	TRDV1	A0A1B0GX56	115 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	GGT3P	A6NGU5	568 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	TRIM64B	A6NI03	449 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CCRL2	O00421	344 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	GABRP	O00591	440 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	SPRY3	O43610	288 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	TIMM8A	O60220	97 aa	Predicted RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	MTRF1	O75570	445 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	RHBDL1	O75783	438 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	FSTL3	O95633	263 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	NRAS	P01111	189 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	IGKV1D-12	P01611	117 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ACAA1	P09110	424 aa	Predicted RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	GIF	P27352	417 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	TGFBR1	P36897	503 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	EFNA4	P52798	201 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	SNRPD2	P62316	118 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	NEDD8	Q15843	81 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CTF1	Q16619	201 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ACSM3	Q53FZ2	586 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CLVS2	Q5SYC1	327 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	PRAMEF6	Q5VXH4	476 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	MALRD1	Q5VYJ5	2156 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	BRICD5	Q6PL45	260 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZNF826P	Q6ZT77	177 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	C1QL2	Q7Z5L3	287 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	SVOP	Q8N4V2	548 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	MS4A15	Q8N5U1	240 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZNF676	Q8N7Q3	588 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	DNAAF1	Q8NEP3	725 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR1M1	Q8NGA1	313 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR5A2	Q8NGI9	324 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	PP6455	Q8WZ26	134 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	TMEM203	Q969S6	136 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	SLC25A28	Q96A46	364 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ELMOD3	Q96FG2	381 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CYYR1	Q96J86	154 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	DIRC2	Q96SL1	478 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	MYCBP	Q99417	103 aa	Predicted RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	NKX3-1	Q99801	234 aa	Predicted RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	FOXC2	Q99958	501 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ADAT1	Q9BUB4	502 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	NAA50	Q9GZZ1	169 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	SLC22A4	Q9H015	551 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	RBM38	Q9H0Z9	239 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR51E2	Q9H255	320 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	RNF167	Q9H6Y7	350 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	HES4	Q9HCC6	221 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	TMEM100	Q9NV29	134 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	BEX4	Q9NWD9	120 aa	Predicted RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	CHCHD3	Q9NX63	227 aa	Known RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	ENPP5	Q9UJA9	477 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	FBXO9	Q9UK97	447 aa	Predicted RBP	4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788	MXRA5	Q9NR99	2828 aa		4.16	□□□□□ -1.74
LMNB1-208	ENST00000504788		A0A1B0GVI7	797 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788		A0A1W2PPK0	400 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788		A0A1W2PPW3	197 aa		4.15	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR5B21	A6NL26	309 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms