RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 KLK6Q92876 244 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 IMP4Q96G21 291 aaKnown RBP4.25□□□□□ -1.73
NIPBL-204ENST00000504430 VSIRQ9H7M9 311 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 KDM5BQ9UGL1 1544 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 C11orf98E9PRG8 122 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 DHRS3O75911 302 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 SEMG1P04279 462 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 CXCL2P19875 107 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 HRH1P35367 487 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF114Q8NC26 417 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 OR9I1Q8NGQ6 314 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 PIFOQ8TCI5 191 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 GNPDA2Q8TDQ7 276 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 ASB13Q8WXK3 278 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 UCN3Q969E3 161 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 SEH1LQ96EE3 360 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 CNRIP1Q96F85 164 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-204ENST00000504430 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 SLC7A10Q9NS82 523 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 BRCA1P38398 1863 aaKnown RBP4.24□□□□□ -1.73
NIPBL-204ENST00000504430 IGLV5-52A0A0A0MRZ9 124 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 FAM236DA0A1B0GTK5 79 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 C15orf61A6NNL5 157 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF850A8MQ14 1090 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 ATP6V0E1O15342 81 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 SYNGR1O43759 233 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 SCRG1O75711 98 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 OR56A5P0C7T3 313 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 FAM236CP0DP71 79 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 PTPRGP23470 1445 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 TSPOP30536 169 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 OR3A4PP47883 348 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 AMTP48728 403 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 GZMMP51124 257 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 CDK5Q00535 292 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 MXD1Q05195 221 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 SRSF9Q13242 221 aaKnown RBP eCLIP4.24□□□□□ -1.73
NIPBL-204ENST00000504430 KCNJ11Q14654 390 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 SRSF7Q16629 238 aaKnown RBP eCLIP4.24□□□□□ -1.73
NIPBL-204ENST00000504430 LRRC26Q2I0M4 334 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 FAM71E1Q6IPT2 247 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 FAM220AQ7Z4H9 259 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 CALHM3Q86XJ0 350 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 WDSUB1Q8N9V3 476 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 SMIM12Q96EX1 92 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 RCHY1Q96PM5 261 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 MEIS3Q99687 375 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 MROQ9BYG7 248 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 EXOSC4Q9NPD3 245 aaKnown RBP4.24□□□□□ -1.73
NIPBL-204ENST00000504430 VWA8A3KMH1 1905 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 GREB1LQ9C091 1923 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-204ENST00000504430 FOXI3A8MTJ6 420 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-204ENST00000504430 C15orf65H3BRN8 121 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 TSHBP01222 138 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 JUNBP17275 347 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-204ENST00000504430 GPR183P32249 361 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 GGT2P36268 569 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 ARL2P36404 184 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 DVL1P1P54792 670 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-204ENST00000504430 CLINT1Q14677 625 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 TRMT12Q53H54 448 aaKnown RBP4.24□□□□□ -1.73
NIPBL-204ENST00000504430 APOOLQ6UXV4 268 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 CREB3L2Q70SY1 520 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 BEST4Q8NFU0 473 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 COQ8AQ8NI60 647 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 STMN2Q93045 179 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 C8orf49Q96NF6 230 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 MS4A8Q9BY19 250 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 COA4Q9NYJ1 87 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 L3MBTL1Q9Y468 752 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 PCM1Q15154 2024 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 DYSFO75923 2080 aa4.24□□□□□ -1.73
NIPBL-204ENST00000504430 RPS10-NUDT3A0A1W2PQS6 291 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 NUDT3O95989 172 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 PAK4O96013 591 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-204ENST00000504430 C1QCP02747 245 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 EDN1P05305 212 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 S100PP25815 95 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 SLC6A1P30531 599 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CDKN2BP42772 138 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 EFNA3P52797 238 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CKS1BP61024 79 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 ECSCRQ19T08 205 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 FBXW9Q5XUX1 488 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 SLC16A13Q7RTY0 426 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 IFNEQ86WN2 208 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CATSPER3Q86XQ3 398 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 L3HYPDHQ96EM0 354 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CMSS1Q9BQ75 279 aaKnown RBP4.23□□□□□ -1.73
NIPBL-204ENST00000504430 R3HDMLQ9H3Y0 253 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 PANK3Q9H999 370 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 TP53TG5Q9Y2B4 290 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CACNA1IQ9P0X4 2223 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 PRORSD1PA6NEY8 169 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 FABP7O15540 132 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 SOX15O60248 233 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 UGT2B11O75310 529 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 C1QL1O75973 258 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 FBP1P09467 338 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 SCGB1A1P11684 91 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms