RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SF3A3Q12874 501 aaKnown RBP eCLIP4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 PRDX4Q13162 271 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 EIF2B1Q14232 305 aaKnown RBP4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 HSP90B2PQ58FF3 399 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 LCN8Q6JVE9 175 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 HCP5Q6MZN7 132 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 DUX4L9Q6RFH8 374 aaPredicted RBP4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 LYPD4Q6UWN0 246 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 C16orf89Q6UX73 402 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 Q6ZSR3 168 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 ZDHHC23Q8IYP9 409 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF561Q8N587 486 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 C11orf42Q8N5U0 333 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 BOLLQ8N9W6 283 aaKnown RBP4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF511Q8NB15 262 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 OR51L1Q8NGJ5 315 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 OR6K6Q8NGW6 343 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 OR4Q3Q8NH05 313 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 HPSE2Q8WWQ2 592 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 DUS3LQ96G46 650 aaKnown RBP4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 CDRT15Q96T59 188 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 PAPOLGQ9BWT3 736 aaKnown RBP4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 NPFFR1Q9GZQ6 430 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 OR51I2Q9H344 312 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 HEXA-AS1Q9H8Q6 139 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 SEBOXQ9HB31 216 aaPredicted RBP4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 SIRT7Q9NRC8 400 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 CENPMQ9NSP4 180 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 TBC1D23Q9NUY8 699 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF319Q9P2F9 582 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 DNAJB9Q9UBS3 223 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 DNAJB11Q9UBS4 358 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 DUX4Q9UBX2 424 aa4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 TBL2Q9Y4P3 447 aaKnown RBP4.97□□□□□ -1.61
LSM3P4-201ENST00000502948 IGKV1D-17A0A075B6S4 117 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 TCRBV5S2A0A599 114 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 MEGF11A6BM72 1044 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 H3BUX3 64 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 ATP8B1O43520 1251 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 ZNF254O75437 659 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 HMGN1P05114 100 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 GYPBP06028 91 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 H2BFMP0C1H6 154 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 CLUP10909 449 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 PSG2P11465 335 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 FAHP16930 419 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 ALOX5APP20292 161 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 GLRA1P23415 457 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 ACKR3P25106 362 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 MPZP25189 248 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 ROM1Q03395 351 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 OR2T5Q6IEZ7 315 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 KCTD18Q6PI47 426 aaPredicted RBP4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 FAM57BQ71RH2 274 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 THAP5Q7Z6K1 395 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 CPLX4Q7Z7G2 160 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 NDUFA11Q86Y39 141 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 ERI1Q8IV48 349 aaKnown RBP4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 FGFRL1Q8N441 504 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 AQP11Q8NBQ7 271 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 POC1AQ8NBT0 407 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 WFDC9Q8NEX5 89 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 OR11H6Q8NGC7 330 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 OR9Q2Q8NGE9 314 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 OR51G2Q8NGK0 314 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 OR6N2Q8NGY6 317 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 OR2T29Q8NH02 315 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 PPP1R35Q8TAP8 253 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 TEX47Q8TBZ9 253 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 PIFOQ8TCI5 191 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 AQP3Q92482 292 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 MALSU1Q96EH3 234 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 PGAM5Q96HS1 289 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 RNF170Q96K19 258 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 HIST1H2AAQ96QV6 131 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 WDR13Q9H1Z4 485 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 PPA2Q9H2U2 334 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 REEP1Q9H902 201 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 HES4Q9HCC6 221 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 USE1Q9NZ43 259 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 TAGLN3Q9UI15 199 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 PITPNC1Q9UKF7 332 aa4.96□□□□□ -1.62
LSM3P4-201ENST00000502948 A0A1W2PQ09 198 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 ZNF850A8MQ14 1090 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 C17orf98A8MV24 154 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 PRR23D1E9PI22 279 aaPredicted RBP4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 H0YAE9 185 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 SLC1A7O00341 560 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 DLGAP1O14490 977 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 AKR7A2O43488 359 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 DCTN3O75935 186 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 PGA5P0DJD9 388 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 PRR23D2P0DMB1 279 aaPredicted RBP4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 NDUFB7P17568 137 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 SLC2A5P22732 501 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 ERVFRD-1P60508 538 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 CDK5Q00535 292 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 RIPPLY1Q0D2K3 151 aa4.95□□□□□ -1.62
LSM3P4-201ENST00000502948 DBPQ10586 325 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms