RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ICAM5Q9UMF0 924 aa15.4■□□□□ 0.06
HMGXB3-201ENST00000502717 GPANK1O95872 356 aa15.4■□□□□ 0.06
HMGXB3-201ENST00000502717 ZNF121P58317 390 aaPredicted RBP15.4■□□□□ 0.06
HMGXB3-201ENST00000502717 OR8G2PQ6IF36 304 aa15.4■□□□□ 0.06
HMGXB3-201ENST00000502717 CCDC88CQ9P219 2028 aa15.4■□□□□ 0.06
HMGXB3-201ENST00000502717 EFNB2P52799 333 aa15.39■□□□□ 0.06
HMGXB3-201ENST00000502717 ZNF66Q6ZN08 573 aa15.39■□□□□ 0.06
HMGXB3-201ENST00000502717 VN1R4Q7Z5H5 301 aa15.39■□□□□ 0.06
HMGXB3-201ENST00000502717 OR52N4Q8NGI2 321 aa15.39■□□□□ 0.06
HMGXB3-201ENST00000502717 OR4F5Q8NH21 305 aa15.39■□□□□ 0.06
HMGXB3-201ENST00000502717 OR4F4Q96R69 305 aa15.39■□□□□ 0.06
HMGXB3-201ENST00000502717 PRSS27Q9BQR3 290 aa15.39■□□□□ 0.06
HMGXB3-201ENST00000502717 OSGIN2Q9Y236 505 aa15.39■□□□□ 0.06
HMGXB3-201ENST00000502717 HS3ST3A1Q9Y663 406 aa15.39■□□□□ 0.06
HMGXB3-201ENST00000502717 RBFOX3A6NFN3 312 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 FAM53BQ14153 422 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 ACOT6Q3I5F7 207 aaPredicted RBP15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 TMEM178AQ8NBL3 297 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 PP6455Q8WZ26 134 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 H0YIG0 161 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 HSPB6O14558 160 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 MUC1P15941 1255 aaPredicted RBP15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 FOXC1Q12948 553 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 C11orf40Q8WZ69 217 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 COX14Q96I36 57 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 TWSG1Q9GZX9 223 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 TLNRD1Q9H1K6 362 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 HOXB3P14651 431 aaPredicted RBP15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 NANOS3P60323 173 aaKnown RBP15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 B2MP61769 119 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 AAED1Q7RTV5 226 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 GLRX5Q86SX6 157 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 OR51H1Q8NH63 302 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 OR2A5Q96R48 311 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 UTP23Q9BRU9 249 aaKnown RBP15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 FOXQ1Q9C009 403 aa15.39■□□□□ 0.05
HMGXB3-201ENST00000502717 C20orf202A1L168 122 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 OR2M5A3KFT3 312 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 C2orf72A6NCS6 295 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 THBS4P35443 961 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 PKIAP61925 76 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 LHFPL2Q6ZUX7 228 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 CFHR5Q9BXR6 569 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 KCNIP2Q9NS61 270 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 AMDHD2Q9Y303 409 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 NPTNQ9Y639 398 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 M0R135 149 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 PRKNO60260 465 aaPredicted RBP15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 HLA-DRB3P79483 266 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 PRSS53Q2L4Q9 553 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 SP6Q3SY56 376 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 TMEM215Q68D42 235 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 ZNF799Q96GE5 643 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 KCNMB2Q9Y691 235 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 LY86O95711 162 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 MOGAT1Q96PD6 335 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 VSIG4Q9Y279 399 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 EIF3GO75821 320 aaKnown RBP eCLIP15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 PNRC1Q12796 327 aaPredicted RBP15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 ZXDCQ2QGD7 858 aaPredicted RBP15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 DRAM2Q6UX65 266 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 OR10AC1Q8NH08 325 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 OR51F2Q8NH61 342 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 OR10J5Q8NHC4 309 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 TMEM68Q96MH6 324 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 IP6K3Q96PC2 410 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 ACTR3CQ9C0K3 210 aaPredicted RBP15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 CACNA1GO43497 2377 aa15.38■□□□□ 0.05
HMGXB3-201ENST00000502717 CST7O76096 145 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 NSUN5P2Q63ZY6 315 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 JMJD6Q6NYC1 403 aaPredicted RBP15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 CCL4L1Q8NHW4 92 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 CPT1CQ8TCG5 803 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 SIRT7Q9NRC8 400 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 LTBP1Q14766 1721 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 TUSC2O75896 110 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 CD200P41217 278 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 DHRS7BQ6IAN0 325 aaPredicted RBP15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 EIF4E3Q8N5X7 224 aaKnown RBP15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 PTX4Q96A99 478 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 SLX1AQ9BQ83 275 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 UCK1Q9HA47 277 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 MRPL22Q9NWU5 206 aaKnown RBP15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 A0A1W2PPE2 198 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 MKRN2OSH3BPM6 223 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 TCAPO15273 167 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 PATE1Q8WXA2 126 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 ZNF586Q9NXT0 402 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 WNT16Q9UBV4 365 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 SLCO1B1Q9Y6L6 691 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 CDC14BO60729 498 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 CTSVO60911 334 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 VAMP5O95183 116 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 PGA3P0DJD8 388 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 UNQ9370/PRO34162Q6UXP9 181 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 MAML2Q8IZL2 1156 aaPredicted RBP15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 ZNF439Q8NDP4 499 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 OR13H1Q8NG92 308 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 PPP1R35Q8TAP8 253 aa15.37■□□□□ 0.05
HMGXB3-201ENST00000502717 PINX1Q96BK5 328 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms