RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 RAB43Q86YS6 212 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 RNF10Q8N5U6 811 aaKnown RBP0.86□□□□□ -2.27
SMAD1-203ENST00000502342 WDR31Q8NA23 367 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 OR4C5Q8NGB2 326 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 OR5AR1Q8NGP9 310 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 OR2T29Q8NH02 315 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 ITLN2Q8WWU7 325 aaPredicted RBP0.86□□□□□ -2.27
SMAD1-203ENST00000502342 OR5P3Q8WZ94 311 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 ZNF75AQ96N20 296 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 TGS1Q96RS0 853 aaKnown RBP0.86□□□□□ -2.27
SMAD1-203ENST00000502342 PEBP4Q96S96 227 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 ZNF649Q9BS31 505 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 API5Q9BZZ5 524 aaKnown RBP0.86□□□□□ -2.27
SMAD1-203ENST00000502342 FAM192AQ9GZU8 254 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 CYP3A43Q9HB55 503 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 HEBP1Q9NRV9 189 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 NDRG2Q9UN36 371 aaKnown RBP0.86□□□□□ -2.27
SMAD1-203ENST00000502342 ACOT9Q9Y305 439 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 TRAPPC1Q9Y5R8 145 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 SAR1BQ9Y6B6 198 aa0.86□□□□□ -2.27
SMAD1-203ENST00000502342 C2orf16Q68DN1 1984 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 OR2AG2A6NM03 316 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 PSCAO43653 123 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 CDH16O75309 829 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 OR2F2O95006 317 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 FARS2O95363 451 aaKnown RBP0.85□□□□□ -2.27
SMAD1-203ENST00000502342 CDS2O95674 445 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 SEC11BP0C7V7 166 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 CSRP1P21291 193 aaKnown RBP0.85□□□□□ -2.27
SMAD1-203ENST00000502342 SLC1A2P43004 574 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 OR1G1P47890 313 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 LGALS7P47929 136 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 FOXA1P55317 472 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 KRTAP12-1P59990 96 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 GRB2P62993 217 aaKnown RBP0.85□□□□□ -2.27
SMAD1-203ENST00000502342 INCA1Q0VD86 236 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 ADIGQ0VDE8 80 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 OR1Q1Q15612 314 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 MRPL2Q5T653 305 aaKnown RBP0.85□□□□□ -2.27
SMAD1-203ENST00000502342 KDM4DQ6B0I6 523 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 WDR82Q6UXN9 313 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 ZYG11AQ6WRX3 759 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 LUZP2Q86TE4 346 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 ITPRIPQ8IWB1 547 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 SLC30A8Q8IWU4 369 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 OR51F2Q8NH61 342 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 RXFP2Q8WXD0 754 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 ISG20Q96AZ6 181 aaKnown RBP0.85□□□□□ -2.27
SMAD1-203ENST00000502342 RCN3Q96D15 328 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 Q96MT0 163 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 RDH12Q96NR8 316 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 NAPGQ99747 312 aaPredicted RBP0.85□□□□□ -2.27
SMAD1-203ENST00000502342 FANCEQ9HB96 536 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 TREX1Q9NSU2 369 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 TMEM106BQ9NUM4 274 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 MCUBQ9NWR8 336 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 ICOSQ9Y6W8 199 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 ENPP4Q9Y6X5 453 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 ELP1O95163 1332 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 MROH5Q6ZUA9 1318 aa0.85□□□□□ -2.27
SMAD1-203ENST00000502342 ZNF608Q9ULD9 1512 aaPredicted RBP0.84□□□□□ -2.27
SMAD1-203ENST00000502342 IGKV1OR2-108A0A075B7D4 117 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 KBTBD11-OT1A0A1B0GTJ5 212 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 MYBPHLA2RUH7 354 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 GGTLC3B5MD39 225 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 ENTPD6O75354 484 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 UPK1BO75841 260 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 TDP2O95551 362 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 CXorf1O96002 111 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 CDK1P06493 297 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 ERCC1P07992 297 aaPredicted RBP0.84□□□□□ -2.27
SMAD1-203ENST00000502342 KRT16P08779 473 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 SLC35G6P0C7Q6 338 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 ZNF708P17019 499 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 STOMP27105 288 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 TUFMP49411 452 aaKnown RBP0.84□□□□□ -2.27
SMAD1-203ENST00000502342 OR2B8PP59922 312 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 HMGN5P82970 282 aaKnown RBP0.84□□□□□ -2.27
SMAD1-203ENST00000502342 TRDNQ13061 729 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 LRRC66Q68CR7 880 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 KCTD16Q68DU8 428 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 CPNE9Q8IYJ1 553 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 GABRG1Q8N1C3 465 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 ZFP62Q8NB50 900 aaPredicted RBP0.84□□□□□ -2.27
SMAD1-203ENST00000502342 OR56A4Q8NGH8 313 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 ZNF606Q8WXB4 792 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 SLC25A44Q96H78 314 aaPredicted RBP0.84□□□□□ -2.27
SMAD1-203ENST00000502342 SCGB3A2Q96PL1 93 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 CHP1Q99653 195 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 HIGD2AQ9BW72 106 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 TMEM185BQ9H7F4 350 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 FAM60AQ9NP50 221 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 FBXO8Q9NRD0 319 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 TMEM100Q9NV29 134 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 HPCAL4Q9UM19 191 aa0.84□□□□□ -2.27
SMAD1-203ENST00000502342 SIGLEC1Q9BZZ2 1709 aa0.84□□□□□ -2.28
SMAD1-203ENST00000502342 SYNJ2BP-COX16A0A087WUM0 186 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 IGLL5B9A064 214 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 TEX46H3BTG2 121 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 BCKDKO14874 412 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms